CF834494

Overview
NameCF834494
Unique NameCF834494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9892 contig Csv1_Contig9892:26..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI_EUSGR (Chalcone--flavonone isomerase OS=Eustoma grandiflorum GN=CHI PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.482e-18
Identity = 64/193 (33.16%), Postives = 96/193 (49.74%), Query Frame = -1
Query:  211 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKK-DSVIAYHFPATSPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 774
            V V+   FPP IT   +TK   L G G+  +EI    +KFTAIG+YLD   +  L  +WKGK    LA   DFF  +++ P EKF ++ +I  + G QY  ++      +   A  Y      A+EK ++ F+ + F   DS++  H P  S T       +  E S   +EN  + E + +  + G +GVSP
Sbjct:   10 VQVESYLFPPTITPPASTKSFLLGGAGVRGLEIGGNFVKFTAIGIYLDETAIPWLAGKWKGKTAEELADSVDFFADIITGPFEKFTQVTLILPLTGQQYSGKVSENCTAQWKAAGVYTPADGKAIEKFLQVFEPQSFSPGDSILFMHSP-ESLTISFGKAGDIPETSNAVIENKKLSEAVIESVI-GEKGVSP 200          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.114e-17
Identity = 64/202 (31.68%), Postives = 104/202 (51.49%), Query Frame = -1
Query:  211 ITMATEVVMVDEIPFPPQI---TTTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKK-DSVIAYHFPATSPTAEIVFTSEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 795
            ++  TEV  V+   FPP +   ++TK   L G G+  +EI+   +KFTAIGVYL+   ++ L  +WKGK    L+   +FF  +++ P EKF ++ +I  + G QY  ++      +   A  Y      A+EK ++ FQ++ F   DS++  H P    +  I F   G   E S   +EN  + E + +  + G +GVSP
Sbjct:    6 VSSVTEV-KVESYVFPPSVKPPSSTKSFLLGGAGVRGLEINGNFVKFTAIGVYLEESGVAVLSGKWKGKTAEELSDSVEFFTDIITGPFEKFTQVTLILPVTGQQYSPKVAENCAAQWKAAGIYTDADGIAIEKFLQVFQTESFTPGDSILFTHSP---ESLTISFGKNGAIPEVSNAVIENKKLSEAVIESII-GEKGVSP 202          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.985e-17
Identity = 64/195 (32.82%), Postives = 93/195 (47.69%), Query Frame = -1
Query:  211 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKK-DSVIAYHFPATSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 774
            V ++   FPP +    T+KP  L G G   +EI    IKFTAIGVYL+   +  L  +WKGK    L    DFF  +VS P EKF ++ +I  + G QY  ++             Y      A+EK +E F+ + F    S++    P  S T  I F+ +G   E   + +EN  + E + +  + G  GVSP
Sbjct:   12 VQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLT--IAFSKDGSLPETGTVVMENKQLSEAVLESII-GKHGVSP 203          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.779e-16
Identity = 61/194 (31.44%), Postives = 94/194 (48.45%), Query Frame = -1
Query:  211 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 774
            +++ E+ FPP      ++  L L G G   +EI    + FTAIGVYL+   +S L  +WKGK    LA + DFF  + + P EKF RI ++K + G QY  ++E         A  Y     +A+EK  E  +++ F   + I +    +  +  I F  EG   E     +E+  + E I +  + G  GVSP
Sbjct:   11 LVIGEVTFPPAAAPPGSSSSLFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESII-GKHGVSP 203          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.759e-16
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = -1
Query:  211 TMATEVVMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIV--FTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 792
            T +   V V+ + FPP++    ++K L L G G+  IEI    IKFTAIGVYL+   +  L  +WKGK    L +  +FF  +V+ P+EKF R+  I  + G QY  ++             Y      A+EK +E F+ + F      A +    SP   +   F+ +G   E     +EN  + E + +  + G  GVSP
Sbjct:    5 TKSVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPP---AASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESII-GKHGVSP 202          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.967e-15
Identity = 60/195 (30.77%), Postives = 97/195 (49.74%), Query Frame = -1
Query:  211 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKD-SVIAYHFPATSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 774
            V V+ + FPP +    + K   L G G+  +EI    IKFTAIGVYL+ + ++ L  +WKGK    +A   DFF  +V+ P EKF ++  I  + G QY  ++            K+    + A +K ++ F+++ F    S++    P  S T  I F+ +G   E     +EN  + E + +  + G +GVSP
Sbjct:   10 VQVESVVFPPAVKPPGSDKTFFLGGAGVRGLEIEGKFIKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLT--ISFSKDGSIPEKENAIIENKQLSEAVLESII-GKKGVSP 201          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI_SAUME (Chalcone--flavonone isomerase OS=Saussurea medusa GN=CHI PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.967e-15
Identity = 59/196 (30.10%), Postives = 95/196 (48.47%), Query Frame = -1
Query:  211 VMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAE--IVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 774
            + V+ I FPP +     T  L L G G+  +EI    +KFT IGVYL+ + +  L  +WKGK  + L     F+  +V+ P EKF ++ +I  + G QY  ++             Y     + +EK +E F+ + F   S I +    TSPT    I F+ +G   E + + +EN  + + + +  + G  GVSP
Sbjct:   10 IQVESIVFPPSVKPPGATTTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPSLAVKWKGKTAAELTDSVQFYRDIVTGPFEKFSQVTMILPLTGKQYSEKVSEMCIGVWKAQGTYTDADTATIEKFLEVFKDENFLPGSSILF---TTSPTGSLTISFSKDGNIPEAATVVLENRKLAQTVIESVI-GEHGVSP 201          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.355e-15
Identity = 58/196 (29.59%), Postives = 90/196 (45.92%), Query Frame = -1
Query:  211 VMVDEIPFPPQITTTKPLN---LLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGKED----SKIKVENANVVEMIKKWYLGGARGVSP 774
            V V+ + FPP +      N   L G G+  ++IH   +KFTAI VYL  + LS L  +WK K    L + D FF  +V+ P EKF+++ +IK + G QY  ++             Y      A++K +  F+   F   S I +     SP   +  +  G E     +   +EN  + E + +  + G  GVSP
Sbjct:    9 VTVENVTFPPTVKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILF---TVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMI-GKNGVSP 200          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.381e-15
Identity = 57/196 (29.08%), Postives = 90/196 (45.92%), Query Frame = -1
Query:  211 VMVDEIPFPPQITTTKPLN---LLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGKED----SKIKVENANVVEMIKKWYLGGARGVSP 774
            V V+ + FPP +      N   L G G+  ++IH   +KFTAI +YL  + LS L  +WK K    L + D FF  +V+ P EKF+++ +IK + G QY  ++             Y      A++K +  F+   F   S I +     SP   +  +  G E     +   +EN  + E + +  + G  GVSP
Sbjct:    9 VTVENVTFPPTVKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILF---TVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMI-GKNGVSP 200          
BLAST of CF834494 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.722e-15
Identity = 60/202 (29.70%), Postives = 94/202 (46.53%), Query Frame = -1
Query:  211 LKITMATEVVMVDEIPFPPQIT---TTKPLNLLGHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPAT-SPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 801
            +  +++   + V+   FPP +    +TK L L G G   +EI    IKFTAIGVYL+   ++ L  +WKGK    L +  +FF  +V+   EKF+R+ +I  + G QY  ++             Y      A+EK +E F+ + F   S I +      S T      S   E  K+ +EN  +   + +  + G  GVSP
Sbjct:    1 MSTSLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVI-GKNGVSP 201          
The following BLAST results are available for this feature:
BLAST of CF834494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CFI_EUSGR2.482e-1833.16Chalcone--flavonone isomerase OS=Eustoma grandiflo... [more]
CFI_GENTR6.114e-1731.68Chalcone--flavonone isomerase OS=Gentiana triflora... [more]
CFI_CAMSI7.985e-1732.82Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_CANGE1.779e-1631.44Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_ELAUM6.759e-1631.19Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI_VERHY1.967e-1530.77Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI_SAUME1.967e-1530.10Chalcone--flavonone isomerase OS=Saussurea medusa ... [more]
CFI3_SOYBN3.355e-1529.59Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI2A_SOYBN4.381e-1529.08Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]
CFI_GOSHI5.722e-1529.70Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834494 ID=CF834494; Name=CF834494; organism=Citrus sinensis; type=EST; length=825bp
TTTTTTTTTTTTTTTTTGAAGGACCTTAGCAAAGCAAATCTTTCATTAAA
ATAGAAGCATGGGTTGCCGGGGTAAACACCGTCATTCAAATTGCACAAAT
TTACAGCAATTCCAAAACCCAAGTGAAGAAGCACTTTTATTAGAAAGCGC
AGAGCTGCTTCATTTTGATAACTCAGCTGAGAGAGTATTGGCTAGAGATG
ATGTTGTTGTAGGAGACACTCCCCTTGCTCCACCCAAGTACCATTTCTTG
ATCATCTCAACCACATTCGCATTCTCCACTTTGATTTTTGAGTCCTCCTT
TCCTTCACTTGTAAACACTATCTCAGCAGTAGGGGATGTTGCCGGAAAAT
GATAAGCAATCACAGAGTCCTTCTTAAAATACTTGGATTGGAAGAATTCA
ACGATTTTCTCAAGGGCAGATTCTTCCTCTTCTTCATATTTGTCAGCTCC
GGCCAATCTGTCCCTCACCGCACTTTCTAACTGAACCCCATATTGTGACC
CCTTGATCTCCTTGATCACAACAATTCTCAAAAATTTCTCTACTGGAGCA
GAGACAAGAGCATCAAAGAAGTCATCATCTTGTGCAAGGGAACTTCCCTG
TTTGCCCTTCCACTGTTGCAAGTGACTCAAAATTTCAGGATCCAAGTAGA
CTCCAATTGCCGTGAACTTGATTTGGAGAAAGTGTATCTCAATGTCTGTT
AAACCATGACCCAGAAGATTCAACGGCTTGGTGGTGGTGATCTGAGGAGG
AAATGGGATTTCATCCACCATTACAACTTCAGTGGCCATGGTAATCTTTA
GTGGGAAATTATTGGAAAATGATGA
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