CF834520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: RS27A_SOLTU (40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27 Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = -2 Query: 171 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLPYVYQKAGGD 341 LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGL YVY KAGGD Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: RS27A_SOLLC (40S ribosomal protein S27a OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27 Identity = 54/57 (94.74%), Postives = 55/57 (96.49%), Query Frame = -2 Query: 171 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLPYVYQKAGGD 341 LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGL YVY KAGGD Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -2 Query: 411 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 584 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 19 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -2 Query: 411 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 584 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 19 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -2 Query: 411 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 584 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 19 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -2 Query: 411 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 584 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 19 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -2 Query: 411 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 584 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 19 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -2 Query: 411 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 584 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 19 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -2 Query: 411 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 584 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 19 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF834520 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.999e-26 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -2 Query: 411 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 584 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 19 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 The following BLAST results are available for this feature:
BLAST of CF834520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834520 ID=CF834520; Name=CF834520; organism=Citrus sinensis; type=EST; length=696bpback to top |