CF834578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT1_RAT (Xylosyltransferase 1 (Fragment) OS=Rattus norvegicus GN=Xylt1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14 Identity = 53/181 (29.28%), Postives = 96/181 (53.04%), Query Frame = 2 Query: 23 ILLKVDKGWNWFIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 +L D W++FI LSA DYP+ T D L AF S RD+NF+ G ++ I+ +D L+L + +++ ++R P+ V GS WF+L+R F+E+ F D+L + +++ +LP E +FH+V+ N+P +T ++++LR W+ + + ++ D+ Sbjct: 273 LLEMTDWPWDFFINLSAADYPIRTNDQLV-AFLSRYRDMNFL---KSHGRDNARFIRKQDLDR-LFLECDTHMWRLGDRR-IPEGIAVD----------GGSDWFLLNRKFVEYVAFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHC-DTMVDNNLRITNWNRKLGCKCQYKHIVDW 436
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT1_MOUSE (Xylosyltransferase 1 OS=Mus musculus GN=Xylt1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14 Identity = 53/181 (29.28%), Postives = 96/181 (53.04%), Query Frame = 2 Query: 23 ILLKVDKGWNWFIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 +L D W++FI LSA DYP+ T D L AF S RD+NF+ G ++ I+ +D L+L + +++ ++R P+ V GS WF+L+R F+E+ F D+L + +++ +LP E +FH+V+ N+P +T ++++LR W+ + + ++ D+ Sbjct: 402 LLEMTDWPWDFFINLSAADYPIRTNDQLV-AFLSRYRDMNFL---KSHGRDNARFIRKQGLDR-LFLECDTHMWRLGDRR-IPEGIAVD----------GGSDWFLLNRKFVEYVAFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHC-DTMVDNNLRITNWNRKLGCKCQYKHIVDW 565
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT1_CANFA (Xylosyltransferase 1 OS=Canis familiaris GN=XYLT1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14 Identity = 53/181 (29.28%), Postives = 96/181 (53.04%), Query Frame = 2 Query: 23 ILLKVDKGWNWFIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 +L D W++FI LSA DYP+ T D L AF S RD+NF+ G ++ I+ +D L+L + +++ ++R P+ V GS WF+L+R F+E+ F D+L + +++ +LP E +FH+V+ N+P +T ++++LR W+ + + ++ D+ Sbjct: 397 LLEMTDWPWDFFINLSAADYPIRTNDQLV-AFLSRYRDMNFL---KSHGRDNARFIRKQGLDR-LFLECDAHMWRLGDRR-IPEGIAVD----------GGSDWFLLNRKFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHC-DTMVDNNLRITNWNRKLGCKCQYKHIVDW 560
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT1_PANTR (Xylosyltransferase 1 OS=Pan troglodytes GN=XYLT1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.168e-13 Identity = 53/181 (29.28%), Postives = 96/181 (53.04%), Query Frame = 2 Query: 23 ILLKVDKGWNWFIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 +L D W++FI LSA DYP+ T D L AF S RD+NF+ G ++ I+ +D L+L + +++ ++R P+ V GS WF+L+R F+E+ F D+L + +++ +LP E +FH+V+ N+P +T ++++LR W+ + + ++ D+ Sbjct: 394 LLEMTDWPWDFFINLSAADYPIRTNDQLV-AFLSRYRDMNFL---KSHGRDNARFIRKQGLDR-LFLECDAHMWRLGDRR-IPEGIAVD----------GGSDWFLLNRRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHC-DTMVDNNLRITNWNRKLGCKCQYKHIVDW 557
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT1_HUMAN (Xylosyltransferase 1 OS=Homo sapiens GN=XYLT1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.168e-13 Identity = 53/181 (29.28%), Postives = 96/181 (53.04%), Query Frame = 2 Query: 23 ILLKVDKGWNWFIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 +L D W++FI LSA DYP+ T D L AF S RD+NF+ G ++ I+ +D L+L + +++ ++R P+ V GS WF+L+R F+E+ F D+L + +++ +LP E +FH+V+ N+P +T ++++LR W+ + + ++ D+ Sbjct: 408 LLEMTDWPWDFFINLSAADYPIRTNDQLV-AFLSRYRDMNFL---KSHGRDNARFIRKQGLDR-LFLECDAHMWRLGDRR-IPEGIAVD----------GGSDWFLLNRRFVEYVTFSTDDLVTKMKQFYSYTLLPAESFFHTVLENSPHC-DTMVDNNLRITNWNRKLGCKCQYKHIVDW 571
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT2_RAT (Xylosyltransferase 2 OS=Rattus norvegicus GN=Xylt2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12 Identity = 56/176 (31.82%), Postives = 89/176 (50.57%), Query Frame = 2 Query: 44 GWNW--FIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 GW W FI LSA DYP T ++L AF S RD NF+ G S+ I+ +D L+ S +++ E R P V GS WFVL+RSF+E+ V+ D L L ++ +LP E +FH+V+ N+P + + ++++LR W+ + + ++ D+ Sbjct: 319 GWTWDFFINLSATDYPTRTNEELV-AFLSKNRDKNFL---KSHGRDNSRFIKKQGLD-RLFHECDSHMWRLGE-RQIPAGIVV----------DGGSDWFVLTRSFVEYVVYTEDPLVAQLRQFYTYTLLPAESFFHTVLENSPACE-SLVDNNLRVTNWNRKLGCKCQYKHIVDW 477
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT2_MOUSE (Xylosyltransferase 2 OS=Mus musculus GN=Xylt2 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11 Identity = 56/176 (31.82%), Postives = 88/176 (50.00%), Query Frame = 2 Query: 44 GWNW--FIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 GW W FI LSA DYP T ++L AF S RD NF+ G S+ I+ +D L+ S +++ E R P V GS WFVL+RSF+E+ V+ D L L ++ +LP E +FH+V+ N+P + ++++LR W+ + + ++ D+ Sbjct: 319 GWTWDFFINLSATDYPTRTNEELV-AFLSKNRDKNFL---KSHGRDNSRFIKKQGLD-RLFHECDSHMWRLGE-RQIPAGIVV----------DGGSDWFVLTRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSPACA-SLVDNNLRVTNWNRKLGCKCQYKHIVDW 477
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT2_CANFA (Xylosyltransferase 2 OS=Canis familiaris GN=XYLT2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11 Identity = 54/173 (31.21%), Postives = 89/173 (51.45%), Query Frame = 2 Query: 47 WNWFIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 W++FI LSA DYP T ++L AF S RD NF+ G S+ I+ +D L+ S +++ E R P V GS WFVL+RSF+E+ V+ D L L ++ +LP E +FH+V+ N+P + + ++++LR W+ + + ++ D+ Sbjct: 322 WDFFINLSATDYPTRTNEELV-AFLSKNRDKNFL---KSHGRDNSRFIKKQGLD-RLFHECDSHMWRLGE-RQIPAGIVV----------DGGSDWFVLTRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSPACE-SLVDNNLRVTNWNRRLGCKCQYKHIVDW 477
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT2_PANTR (Xylosyltransferase 2 OS=Pan troglodytes GN=XYLT2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11 Identity = 54/173 (31.21%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 47 WNWFIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 W++FI LSA DYP T ++L AF S RD NF+ G S+ I+ +D L+ S +++ E R P V GS WFVL+RSF+E+ V+ D L L ++ +LP E +FH+V+ N+ + T ++++LR W+ + + ++ D+ Sbjct: 322 WDFFINLSATDYPTRTNEELV-AFLSKNRDKNFL---KSHGRDNSRFIKKQGLD-RLFHECDSHMWRLGE-RQIPAGIVV----------DGGSDWFVLTRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSLACE-TLVDNNLRVTNWNRKLGCKCQYKHIVDW 477
BLAST of CF834578 vs. ExPASy Swiss-Prot
Match: XYLT2_HUMAN (Xylosyltransferase 2 OS=Homo sapiens GN=XYLT2 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11 Identity = 54/173 (31.21%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 47 WNWFIALSALDYPLVTQDDLAHAFSSVRRDLNFIDHTSDLGWKESQRIQPVIVDPGLYLARKSQIFQATEKRPTPDAFKVFTGRTERGSCIAGSQWFVLSRSFLEFCVFGWDNLPRTLLMYFNNVMLPQEVYFHSVICNAPEFKNTTINSDLRYMIWDNPPKMEPHFLNVSDY 565 W++FI LSA DYP T ++L AF S RD NF+ G S+ I+ +D L+ S +++ E R P V GS WFVL+RSF+E+ V+ D L L ++ +LP E +FH+V+ N+ + T ++++LR W+ + + ++ D+ Sbjct: 322 WDFFINLSATDYPTRTNEELV-AFLSKNRDKNFL---KSHGRDNSRFIKKQGLD-RLFHECDSHMWRLGE-RQIPAGIVV----------DGGSDWFVLTRSFVEYVVYTDDPLVAQLRQFYTYTLLPAESFFHTVLENSLACE-TLVDNNLRVTNWNRKLGCKCQYKHIVDW 477 The following BLAST results are available for this feature:
BLAST of CF834578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834578 ID=CF834578; Name=CF834578; organism=Citrus sinensis; type=EST; length=741bpback to top |