CF834579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7_ARATH (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.876e-46 Identity = 91/139 (65.47%), Postives = 111/139 (79.86%), Query Frame = -3 Query: 375 PQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKLKMEVKSHLQDVKKSVHSK 791 P + PDQ +KLKQL+V TLAE NKVL YD L+ EL+V NVRELEDFLINECMY GIV+GKL+QL+RCFEV F AGRDLR GQL NM+ +LSNWL+TS+N+L IQDKIKWA+ M E KK + E + +++VKKS+ K Sbjct: 85 PHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELDVSNVRELEDFLINECMYAGIVRGKLDQLKRCFEVPFAAGRDLRPGQLGNMLHTLSNWLNTSENLLISIQDKIKWADNMSEMDKKHRKEAEEGVEEVKKSLSMK 223
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7_DICDI (COP9 signalosome complex subunit 7 OS=Dictyostelium discoideum GN=csn7 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = -3 Query: 393 PQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKLKMEVKSHLQDVK 791 PQ+ P KLKQL++ L+ + V+ Y L +++E+ NVRELED +I+ +Y I+KGKL+Q + E+ F GRD++ QL +M+ L+NW TS +L I I ++ + + +K K E +S + K Sbjct: 88 PQLTPQMITKLKQLTIVFLSSTSNVIPYSVLQEQIEITNVRELEDLIIDS-IYQNIIKGKLDQKNKHLEIDFSIGRDVQPEQLDSMINCLNNWSSTSQKLLDDISGLITHSDKVHLQYRKEKEEFESKFEIAK 219
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7B_HUMAN (COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 48/136 (35.29%), Postives = 83/136 (61.03%), Query Frame = -3 Query: 384 PQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKLKMEVKSHLQDVKKSV 791 P++ Q KLK L++ +LA K + Y LLK+LE+ N+RELED +I E +Y I++GKL+Q + EV F GRD+R + N++++L W D + VL I+ ++ A E + + +V++ + ++KK++ Sbjct: 86 PELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTL 220
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7B_BOVIN (COP9 signalosome complex subunit 7b OS=Bos taurus GN=COPS7B PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 48/136 (35.29%), Postives = 83/136 (61.03%), Query Frame = -3 Query: 384 PQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKLKMEVKSHLQDVKKSV 791 P++ Q KLK L++ +LA K + Y LLK+LE+ N+RELED +I E +Y I++GKL+Q + EV F GRD+R + N++++L W D + VL I+ ++ A E + + +V++ + ++KK++ Sbjct: 86 PELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHSRTQQQVEAEVTNIKKTL 220
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7B_MOUSE (COP9 signalosome complex subunit 7b OS=Mus musculus GN=Cops7b PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 48/136 (35.29%), Postives = 83/136 (61.03%), Query Frame = -3 Query: 384 PQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKLKMEVKSHLQDVKKSV 791 P++ Q KLK L++ +LA K + Y LLK+LE+ N+RELED +I E +Y I++GKL+Q + EV F GRD+R + N++++L W D + VL I+ ++ A E + + +V++ + ++KK++ Sbjct: 86 PELSVAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLII-EAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHHRTQQQVEAEVSNIKKTL 220
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7_DROME (COP9 signalosome complex subunit 7 OS=Drosophila melanogaster GN=CSN7 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.081e-15 Identity = 52/144 (36.11%), Postives = 85/144 (59.03%), Query Frame = -3 Query: 369 FPQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKL--KMEVKSHLQDVKKSVHSKVN 794 F ++ P KL+ L++ +LA K + Y LL ELE+ NVR LED +I E +Y I+ GKL Q R EV + GRD+ G ++++L W+++ D+V + I+ +IK+A E+ K+L K V+ L ++KK + S+ + Sbjct: 93 FIELTPAMQKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHLEDIII-EAIYADIIHGKLFQNTRILEVDYAQGRDIPPGYTGQIVETLQAWVNSCDSVSNCIEMQIKYAN--AEKSKRLINKERVEQDLINLKKVLKSQTS 233
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7A_MOUSE (COP9 signalosome complex subunit 7a OS=Mus musculus GN=Cops7a PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 47/138 (34.06%), Postives = 80/138 (57.97%), Query Frame = -3 Query: 384 HFPQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKLKMEVKSHLQDVKKSV 797 + P + Q KL+ LSV TLA K + Y LL+ L + NVR+LED +I E +Y +++G L+Q + EV + GRD++ L + Q+L W + VLS I++++ A E+ LK +++S + ++KK++ Sbjct: 84 NLPPLTDAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVI-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTI 220
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7A_PONAB (COP9 signalosome complex subunit 7a OS=Pongo abelii GN=COPS7A PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14 Identity = 46/138 (33.33%), Postives = 80/138 (57.97%), Query Frame = -3 Query: 384 HFPQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKLKMEVKSHLQDVKKSV 797 + P + Q KL+ LSV TLA K + Y LL+ L + NVR+LED +I E +Y +++G L+Q + EV + GRD++ L + ++L W + VLS I++++ A E+ LK +++S + ++KK++ Sbjct: 84 NLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVI-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTI 220
BLAST of CF834579 vs. ExPASy Swiss-Prot
Match: CSN7A_HUMAN (COP9 signalosome complex subunit 7a OS=Homo sapiens GN=COPS7A PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14 Identity = 46/138 (33.33%), Postives = 80/138 (57.97%), Query Frame = -3 Query: 384 HFPQVVPDQAVKLKQLSVFTLAEMNKVLSYDQLLKELEVVNVRELEDFLINECMYVGIVKGKLNQLRRCFEVQFVAGRDLRHGQLVNMMQSLSNWLDTSDNVLSVIQDKIKWAETMCEEGKKLKMEVKSHLQDVKKSV 797 + P + Q KL+ LSV TLA K + Y LL+ L + NVR+LED +I E +Y +++G L+Q + EV + GRD++ L + ++L W + VLS I++++ A E+ LK +++S + ++KK++ Sbjct: 84 NLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVI-EAVYADVLRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKTI 220 The following BLAST results are available for this feature:
BLAST of CF834579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834579 ID=CF834579; Name=CF834579; organism=Citrus sinensis; type=EST; length=799bpback to top |