CF834582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.503e-55 Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQKAKEKLASKS 382 YR RHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRN RTVNRAYGGVLSG AVRERIIRAFLVEEQKIV+KVLKIQKAKEKLA+KS Sbjct: 7 YRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.661e-54 Identity = 105/114 (92.11%), Postives = 109/114 (95.61%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQKAKEKLASKS 382 YR RHSYATKSNQHRVVKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRN RTVNRAYGGVLSGGAVRERIIRAFLVEEQKIV+KVLKIQK KEK A+K+ Sbjct: 7 YRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAKN 120
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.170e-54 Identity = 103/114 (90.35%), Postives = 111/114 (97.37%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQKAKEKLASKS 382 YR+RHSYATKSNQHR+VKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRN RTVNRAYGGVLSG AVRERIIRAFLVEEQKIV+KVLK+QKAKEK+A K+ Sbjct: 7 YRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.077e-53 Identity = 102/113 (90.27%), Postives = 108/113 (95.58%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQKAKEKLASK 379 YR+RHSYATKSNQHR+VKTPGGKL YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRN RTVNRAYGGVLSG AVRERIIRAFLVEEQKIV+KVLK+QKAKEK+A K Sbjct: 7 YRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 6.980e-53 Identity = 101/114 (88.60%), Postives = 108/114 (94.74%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQKAKEKLASKS 382 YR+RHSYATKSNQHR+VKTPGGKL YQ+T KRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIV+KVLK+QKAKEK A KS Sbjct: 7 YRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL34A_SCHPO (60S ribosomal protein L34-A OS=Schizosaccharomyces pombe GN=rpl34a PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.056e-24 Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLK 346 YR R +Y T+SN+ R++KTPG + Y KK + P+C TG +QGIP LRP E+ +RLS N +TV RAYGG LS AV++RI+RAFL+EEQKIV++ LK Sbjct: 7 YRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAFLIEEQKIVKQKLK 106
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL34B_SCHPO (60S ribosomal protein L34-B OS=Schizosaccharomyces pombe GN=rpl34b PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 8.891e-24 Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQKAK 361 YR R +Y T+SN+ R++KTPG + Y KK + P+C TG +QGIP LRP E+ +RLS N + V RAYGG LS AV++RI+RAFL+EEQKIV++ LK K Sbjct: 7 YRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAFLIEEQKIVKQKLKQMSQK 111
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL34A_YEAST (60S ribosomal protein L34-A OS=Saccharomyces cerevisiae GN=RPL34A PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.763e-23 Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQ----KAKEKLASK 379 +R R+ Y T+SN+ +VVKTPGG L Q KK A+ PKC G +QGI LRP +Y + +S+ +TV+RAYGG V+ERIIRAFL+EEQKIV+KV+K Q K EK A K Sbjct: 7 FRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQY--ATVSKTHKTVSRAYGGSRCANCVKERIIRAFLIEEQKIVKKVVKEQTEAAKKSEKKAKK 121
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL34B_YEAST (60S ribosomal protein L34-B OS=Saccharomyces cerevisiae GN=RPL34B PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.830e-23 Identity = 57/113 (50.44%), Postives = 76/113 (67.26%), Query Frame = 2 Query: 41 YRTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQKAKEKLASK 379 +R R+ Y T+SN+ +VVKTPGG L Q KK A+ PKC G +QGI LRP +Y + +S+ +TV+RAYGG V+ERI+RAFL+EEQKIV+KV+K Q K + K Sbjct: 7 FRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQY--ATVSKTHKTVSRAYGGSRCANCVKERIVRAFLIEEQKIVKKVVKEQTEAAKKSEK 117
BLAST of CF834582 vs. ExPASy Swiss-Prot
Match: RL34_AEDAL (60S ribosomal protein L34 OS=Aedes albopictus GN=RpL34 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22 Identity = 58/119 (48.74%), Postives = 80/119 (67.23%), Query Frame = 2 Query: 44 RTRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNMRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVRKVLKIQKAKEKLASKS*IETAA 400 R R SY TKSN+ RVV+TPGG+LVY KK+ + PKC +++ GI RP+E R R+ R ++TV R +GGVL +RERIIRAFL++EQK+V KVLK Q+ + ++ I+ A Sbjct: 8 RRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAFLIDEQKVV-KVLKAQQLGKPVSKPPKIQKTA 123 The following BLAST results are available for this feature:
BLAST of CF834582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834582 ID=CF834582; Name=CF834582; organism=Citrus sinensis; type=EST; length=545bpback to top |