CF834631
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834631 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 276.174 bits (705), Expect = 6.173e-76 Identity = 134/172 (77.91%), Postives = 155/172 (90.12%), Query Frame = -3 Query: 205 RLNSSYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 714 +L YLHDYAGI TSVGLTANPIVNFS V+GTN+++LGTD+SFD+K+G+FTKCNAGLSF NADL+ASLNLNNKGD+L ASYYH V+PL TAVGAEV HSFST +N ITVGTQH LDPLT++KAR+NN G ASAL+QHEWRPKSLFT+SGEVDTK+++K AKFGLALALKP Sbjct: 105 KLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGLALALKP 276 HSP 2 Score: 30.0314 bits (66), Expect = 6.173e-76 Identity = 12/15 (80.00%), Postives = 15/15 (100.00%), Query Frame = -2 Query: 701 SFKVPDQRSGKVELQ 745 SF+VPDQRSGK+E+Q Sbjct: 95 SFRVPDQRSGKLEVQ 109
BLAST of CF834631 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 258.07 bits (658), Expect = 5.626e-71 Identity = 130/172 (75.58%), Postives = 149/172 (86.63%), Query Frame = -3 Query: 205 RLNSSYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 714 ++ YLH+YAGISTS+GLT NP VNFS VIG+NVL++GTD+SFD+KSGNFTK NAGLSF DLIASL +N+KGD L ASYYH VNPL TAVGAEV H S+ D+TITVGTQH LDPLT++KARVN+AGIASALIQHEW+PKS FTISGEVDTK+I+KSAK GLALALKP Sbjct: 105 KVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGLALALKP 276 HSP 2 Score: 31.5722 bits (70), Expect = 5.626e-71 Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = -2 Query: 701 SFKVPDQRSGKVELQ 745 SFKVPDQ SGKVELQ Sbjct: 95 SFKVPDQNSGKVELQ 109
BLAST of CF834631 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 9.569e-71 Identity = 125/172 (72.67%), Postives = 154/172 (89.53%), Query Frame = -3 Query: 205 RLNSSYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLT--AVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 714 ++ YLH+YAGI+TS+GLTA+P+VNFS V G N ++LGTDLSFD+ +GNFTKCNAGLSF+++DLIASL LN+KGD+++ASYYH V P+T AVGAE+ HSFS+ +NT+T+GTQH+LDPLTT+KARVN+ G ASALIQHEWRPKSLFTISGEVDT+AIEKSAK GLA+ALKP Sbjct: 105 KVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVALKP 276 HSP 2 Score: 29.6462 bits (65), Expect = 9.569e-71 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = -2 Query: 701 SFKVPDQRSGKVELQ 745 SF VPDQ+SGKVELQ Sbjct: 95 SFVVPDQKSGKVELQ 109
BLAST of CF834631 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 2.738e-64 Identity = 119/172 (69.19%), Postives = 138/172 (80.23%), Query Frame = -3 Query: 205 RLNSSYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 714 ++ YLH+YAGIS+SVGL ANPIVNFS+VIGTN L+ G D+SFD+K G TK NA ++F DLI SL LN KGD L+ASYYH +NPL TAVG ++ H FST +NT T+GTQH LDPLTT+K RV N+G ASALIQHEWRPKSL TIS EVDTKAIEKSAK GL+LALKP Sbjct: 105 KVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIGLSLALKP 276 HSP 2 Score: 29.6462 bits (65), Expect = 2.738e-64 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = -2 Query: 701 SFKVPDQRSGKVELQ 745 SFKVP+Q SGKVELQ Sbjct: 95 SFKVPEQTSGKVELQ 109
BLAST of CF834631 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 242.276 bits (617), Expect = 3.570e-64 Identity = 117/165 (70.91%), Postives = 139/165 (84.24%), Query Frame = -3 Query: 205 YLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 699 Y HDYAGISTSVG TA PIVNFS V+GTN LSLGTD++++++SGNF NAG +F DL ASL LN+KG+ L ASYY V+P T VGAE+ H+F+T +N ITVGTQH LDPLTT+KARVNNAG+A+ALIQHEWRPKS FT+SGEVD+KAI+KSAK G+ALALKP Sbjct: 110 YFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPSTVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274 HSP 2 Score: 24.6386 bits (52), Expect = 3.570e-64 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = -2 Query: 695 KVPDQRSGKVELQLF 739 K+PD +SGK E+Q F Sbjct: 97 KLPDHKSGKAEVQYF 111
BLAST of CF834631 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 4.655e-64 Identity = 115/166 (69.28%), Postives = 140/166 (84.34%), Query Frame = -3 Query: 205 YLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVN-PLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 699 Y HDYAG+S S+GLTA+P+VN S+V GT L++G D+S D+ +GN TK NAGLSF+N DLIASLNLNNKGDSL ASYYH VN TAVGAE+ HSFS+ +N++T GTQH LDPLT +KAR NN+G ASAL+QHEWRPKS++TIS EVDTKAI+KS+K G+A+ALKP Sbjct: 109 YSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKSSKVGIAVALKP 274 HSP 2 Score: 29.261 bits (64), Expect = 4.655e-64 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = -2 Query: 701 SFKVPDQRSGKVELQ 745 SF VPDQRSGK ELQ Sbjct: 94 SFAVPDQRSGKFELQ 108
BLAST of CF834631 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 1.598e-61 Identity = 113/171 (66.08%), Postives = 137/171 (80.12%), Query Frame = -3 Query: 205 RLNSSYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL-TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALKP 714 ++ YLHDYAGI+ S+GLTANP+VN S GT+ L++G D+S D+ + NF K NA LS+ N DLIASLNLNNKGDSL ASYYH V TAVGAE+ HSFS+ +N++T GTQH LDPLT +KAR+NN+G ASALIQHE+ PKSL TIS EVDTKAIEKS+K G+A+ALKP Sbjct: 105 KVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKSSKVGIAIALKP 275 HSP 2 Score: 30.0314 bits (66), Expect = 1.598e-61 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = -2 Query: 701 SFKVPDQRSGKVELQ 745 SF VPDQ+SGKVELQ Sbjct: 95 SFAVPDQKSGKVELQ 109
BLAST of CF834631 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.815e-53 Identity = 103/171 (60.23%), Postives = 129/171 (75.44%), Query Frame = -3 Query: 208 RLNSSYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFV--NPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALALK 714 +L YLH+YAG++ SVGL +NP+VN S G+ LS+G D+SFD+ + +FTK NA LS + DLIASL+LNN GD+L ASYYH V + TAVGAE+ HS S ++T+ G+QH LDP TT+K R NN G+ASAL+QHEWRPKS TISG+VDTKAIEKS K GL+L LK Sbjct: 106 KLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKSTKVGLSLVLK 276 The following BLAST results are available for this feature:
BLAST of CF834631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834631 ID=CF834631; Name=CF834631; organism=Citrus sinensis; type=EST; length=746bpback to top |