CF834802

Overview
NameCF834802
Unique NameCF834802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length405
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6213 contig Csv1_Contig6213:187..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF834802 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.614e-14
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = -2 
Query:  189 CNGKSSWPELVGVNGEIAAATIQKENPNVQAIIILEGTPVTQDFRCXXXXXXXXXXXXXXXVPRIG 386
            C GKSSWP LVGV G +A A I+++NPNV+A+I+ EGTPVT+DFRC                PRIG
Sbjct:    3 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68
[Close]
BLAST of CF834802 vs. ExPASy Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11
Identity = 27/46 (58.70%), Postives = 39/46 (84.78%), Query Frame = -2 
Query:  249 CNGKSSWPELVGVNGEIAAATIQKENPNVQAIIILEGTPVTQDFRC 386
            C GK++WPELVG +G +AAAT+++EN NV AI++ EG+ +T+DFRC
Sbjct:    4 CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRC 49
The following BLAST results are available for this feature:
BLAST of CF834802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ITH5_CUCMA5.614e-1453.03Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
ICI_LINUS4.448e-1158.70Proteinase inhibitor OS=Linum usitatissimum PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06C06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834802 ID=CF834802; Name=CF834802; organism=Citrus sinensis; type=EST; length=405bp
TAACCCCTTTAAGATTACACTCATTAGGAGAACCCGATTGTTGGACCTTT
AGAACATCCATGCATGCTCTATTAAACAACACTACTTGTTCATTTATTTT
ACTAATACATAGTTAAGTGCCCATAAACAAGCAGTTAATCCTGACCATCC
ATCCAGCCATGATGATTGCAGATAATCGTCGAAGTTCAGCCAATCCGAGG
AACTTGAACCACCTTCTCATATTTGTCAACCACAACTCGAACCCGATCAC
AACGAAAATCTTGTGTAACTGGAGTTCCCTCAAGTATTATGATTGCCTGA
ACATTAGGATTCTCTTTCTGTATCGTAGCAGCAGCAATCTCCCCGTTTAC
ACCAACCAATTCTGGCCATGAACTCTTGCCATTACACTCAAATTGAGTTA
CGATA
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