CF834814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834814 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.501e-20 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = -2 Query: 355 PETQRPSLFQSLLYEAVGRTVNPVSGPVGLLWTGNWNVCQSAVERVLCGGALQPL-------------PCPLAPELDDVSESAVNCTNNSPKD 594 P++QRP+LFQSLLYEA GRTVNPV+G +G+LWTGNWN+CQ+AVE VL GG+L+P+ P P + E ++ +N N D Sbjct: 56 PDSQRPALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGFAGFPSPTSEEASEICTEMLNLQQNDSTD 148
BLAST of CF834814 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.266e-20 Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = -2 Query: 370 PETQRPSLFQSLLYEAVGRTVNPVSGPVGLLWTGNWNVCQSAVERVLCGGALQPLPCPL---------APELDDVSESAVNCTN 594 PE+Q P+LFQSLLYEA GRTVNPV+G VGLLWTGNWNVCQ+AVE VL GG+L+P+P L +P D+ SE N Sbjct: 56 PESQCPALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGFPSPTSDEASEICTEMLN 139
BLAST of CF834814 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.517e-17 Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = -2 Query: 430 PETQRPSLFQSLLYEAVGRTVNPVSGPVGLLWTGNWNVCQSAVERVLCGGALQPL 594 PE QRP+LFQSLL+EA GRTVNPV+G VG+LWT NW+VCQ+AVE VL GG L+P+ Sbjct: 56 PELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPI 110
BLAST of CF834814 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.206e-15 Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = -2 Query: 415 PETQRPSLFQSLLYEAVGRTVNPVSGPVGLLWTGNWNVCQSAVERVLCGGALQPLPCPLA 594 P+ RP++F+SLLYEA GR VNP+ G VGLLW+GNW++CQ+AVE V+ G + P+ C A Sbjct: 58 PDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAA 117
BLAST of CF834814 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.597e-13 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = -2 Query: 415 PETQRPSLFQSLLYEAVGRTVNPVSGPVGLLWTGNWNVCQSAVERVLCGGALQPLPCPLA 594 P+ RP++F+SLLYEA GR VNPV G VGL+W+GNW CQ+AV+ VL G + P P A Sbjct: 58 PDHLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSA 117
BLAST of CF834814 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = -2 Query: 448 PETQRPSLFQSLLYEAVGRTVNPVSGPVGLLWTGNWNVCQSAVERVLCG 594 P RP +F+SLL+EA GR VNP+ G VGLLW+GNW +CQ AVE V+ G Sbjct: 58 PNHLRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKG 106 The following BLAST results are available for this feature:
BLAST of CF834814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834814 ID=CF834814; Name=CF834814; organism=Citrus sinensis; type=EST; length=595bpback to top |