CF834827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_ARATH (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=EMB1467 PE=1 SV=2) HSP 1 Score: 324.324 bits (830), Expect = 2.951e-88 Identity = 161/208 (77.40%), Postives = 171/208 (82.21%), Query Frame = 2 Query: 2 MGLGLLASRAMRPH----KNSNSRVFIRSIAFKXXXXXXXXXXXXXXXXXXXXXXXRSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 MGLG+LASR +RP ++ S F+R+I K R+PVGGARVHF NPEDAIEVFVDGY +K+PKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG Sbjct: 1 MGLGILASRTIRPASRLLQSQTSNFFLRTIVSKPELQSPESAAVSEPEPPTQILPPRNPVGGARVHFSNPEDAIEVFVDGYAVKVPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 208
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_SOLTU (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.050e-85 Identity = 158/204 (77.45%), Postives = 165/204 (80.88%), Query Frame = 2 Query: 2 MGLGLLASRAMRPHKNSNSRVFIRSIAFKXXXXXXXXXXXXXXXXXXXXXXXRSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 MGLGLLASRA+R + + R+I R PVGGARVH PNPED IEVFVDGYP+KIPKG TVLQACE+AGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG Sbjct: 1 MGLGLLASRALRSSRIIRNST--RTIVSTPELKNADAAAAAAAADAPSDLPKRHPVGGARVHLPNPEDVIEVFVDGYPVKIPKGMTVLQACEIAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 202
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_RECAM (NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Reclinomonas americana GN=NAD11 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.063e-57 Identity = 101/135 (74.81%), Postives = 115/135 (85.19%), Query Frame = 2 Query: 209 IEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 + VFVDG +++ KG T+LQAC G++IPRFCYH RLSIAGNCRMCLVEVEKSPKPVASCAMP + MKI T+TPL KKAREGV+EFLL+NHPLDCPICDQGGECDLQD +M +GSDRGRF E KR V DKN+G Sbjct: 2 VNVFVDGLSVEVKKGATILQACAQVGIEIPRFCYHERLSIAGNCRMCLVEVEKSPKPVASCAMPVMDNMKIFTNTPLVKKAREGVLEFLLVNHPLDCPICDQGGECDLQDLTMVYGSDRGRFHEYKRGVEDKNIG 136
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_RAT (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus GN=Ndufs1 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.337e-55 Identity = 102/152 (67.11%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 158 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDR RF E KR+V DKN+G Sbjct: 15 KSPKGYVRSTGTAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIG 166
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_PONPY (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pongo pygmaeus GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.337e-55 Identity = 101/152 (66.45%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 158 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+G Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIG 166
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_PANTR (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pan troglodytes GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.337e-55 Identity = 101/152 (66.45%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 158 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+G Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSKKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIG 166
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_MOUSE (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus GN=Ndufs1 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.337e-55 Identity = 102/151 (67.55%), Postives = 116/151 (76.82%), Query Frame = 2 Query: 161 SPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FGSDR RF E KR+V DKN+G Sbjct: 16 SPKGYVRTTGTAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIG 166
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_MACFA (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Macaca fascicularis GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.337e-55 Identity = 101/152 (66.45%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 158 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+G Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIG 166
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_HUMAN (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Homo sapiens GN=NDUFS1 PE=1 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 7.337e-55 Identity = 101/152 (66.45%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 158 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+G Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIG 166
BLAST of CF834827 vs. ExPASy Swiss-Prot
Match: NDUS1_GORGO (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.337e-55 Identity = 101/152 (66.45%), Postives = 117/152 (76.97%), Query Frame = 2 Query: 158 RSPVGGARVHFPNPEDAIEVFVDGYPLKIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASCAMPALPGMKIKTDTPLAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRSVVDKNLG 613 +SP G R + IEVFVDG + + G TVLQACE G+ IPRFCYH RLS+AGNCRMCLVE+EK+PK VA+CAMP + G I T++ +KKAREGVMEFLL NHPLDCPICDQGGECDLQDQSM FG+DR RF E KR+V DKN+G Sbjct: 15 KSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIG 166 The following BLAST results are available for this feature:
BLAST of CF834827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834827 ID=CF834827; Name=CF834827; organism=Citrus sinensis; type=EST; length=614bpback to top |