CF834849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834849 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 77/187 (41.18%), Postives = 118/187 (63.10%), Query Frame = 3 Query: 36 ALLIILLQFSTNLASNPSDNSNIEYIRTSWGGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDE---LGHIRNSNFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINSYAA 587 ALL+IL S A+ ++I+TS T Y +C +SLS YA I++NP+ LA+TAL ++L T+ M ++++F G+ R+ A A+ DC+E + DS+D + S DE L H + ++F M +V+TWVSAALTDE TC+DG G+ ++ K +R ++ VA +TSNALAL+N++AA Sbjct: 12 ALLVILAAASAAPAN--------QFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYA-AIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAA 189
BLAST of CF834849 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.618e-14 Identity = 49/189 (25.93%), Postives = 102/189 (53.97%), Query Frame = 3 Query: 30 LVALLIILLQFSTNLASNPS----DNSNIEYIRTSWGGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKM-SRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHI-RNSNFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINS 578 L+A ++ + +TN N +++ +++ T+Y LC+ +++ K ++ K + +LN+T KA K + K+ ++ G+ PRE A+ DC+E I +++DEL ++++L + + D++T +S+A+T++ TC+DG +R + + + + V H+ SNALA+I + Sbjct: 31 LLASIVGIAATTTNQNKNQKITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVT-ALHDCLETIDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKN 218
BLAST of CF834849 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13 Identity = 52/198 (26.26%), Postives = 106/198 (53.54%), Query Frame = 3 Query: 18 LRHALVALLIILLQFSTNLASNPSDN------SNIEYIRTSWGGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKS---TSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLT--MGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINS 578 L A VALL + + ++ ++ S+ +R+S T Y LC ++ ++ K + ++N+T+ A + T + ++K + G+ PRE A+ DC+E I +++DEL +++++L H+ + L GD++T +S+A+T+++TC+DG ++ + + + + V H+ SNALA+I + Sbjct: 22 LLSAAVALLFVAAVAGISAGASKANEKRTLSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRK--GLTPREKT-ALHDCLETIDETLDELHETVEDL-HLYPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKN 215
BLAST of CF834849 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.895e-13 Identity = 52/189 (27.51%), Postives = 97/189 (51.32%), Query Frame = 3 Query: 30 LVALLIILLQFSTNLASNPSDNSNIEY---IRTSWGGTIYRRLCYRSLSVY--AAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNS-NFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINS 578 LV +I + N N DN N + +++S T Y LC+ +++ A+K ++ K + +LNIT A + + K+ + + RE A+ DC+E I +++DEL ++++L N + D++T +SAA+T++ TC+DG N++ + + + V + SNALA+I + Sbjct: 39 LVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKV-ALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKN 226
BLAST of CF834849 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.895e-13 Identity = 52/189 (27.51%), Postives = 97/189 (51.32%), Query Frame = 3 Query: 30 LVALLIILLQFSTNLASNPSDNSNIEY---IRTSWGGTIYRRLCYRSLSVY--AAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNS-NFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALINS 578 LV +I + N N DN N + +++S T Y LC+ +++ A+K ++ K + +LNIT A + + K+ + + RE A+ DC+E I +++DEL ++++L N + D++T +SAA+T++ TC+DG N++ + + + V + SNALA+I + Sbjct: 39 LVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKV-ALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKN 226
BLAST of CF834849 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11 Identity = 50/194 (25.77%), Postives = 106/194 (54.64%), Query Frame = 3 Query: 30 LVALLIILLQFSTNLASNPSDNSNI--------EYIRTSWGGTIYRRLCYRSL---SVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRF-PGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLT-MGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALI 572 LVA +I ++ + + N D+++I ++++ T++ LCY ++ S ++ K+ S K + +LNIT+KA + + ++ + G+ PRE A+ DC+E + +++DEL ++++L N + D++T +S+A+T+++TC+DG ++ + ++ + V + SNALA+I Sbjct: 31 LVAAVIGVVAGVKSHSKNSDDHADIMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQ-KDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKV-ALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222
BLAST of CF834849 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11 Identity = 54/190 (28.42%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 33 VALLIILLQFSTNLASNPSDNSNIEYIRTS-------WGGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKST---SRMMVKMSRFPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTDEDTCVDGLQGRPLNRYTKTMIRRHILKVAHLTSNALALI 572 V L+ +++ + ++ N SDN+ E I TS T Y+ C +L AK S+P L TA N T+K S+ M+++ + P A+ C E++ +I EL S +ELG + ++ W+SA ++ E TC+DG QG N I++ + LT N LA++ Sbjct: 24 VLLISMVVAVTIGVSVNKSDNAGDEEITTSVKAIKDVCAPTDYKETCEDTLRK-DAKDTSDPLELVKTAFNATMKQISDVAKKSQTMIELQKDP-----RAKMALDQCKELMDYAIGELSKSFEELGKFEFHKVDEALVKLRIWLSATISHEQTCLDGFQGTQGN--AGETIKKALKTAVQLTHNGLAMV 205 The following BLAST results are available for this feature:
BLAST of CF834849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834849 ID=CF834849; Name=CF834849; organism=Citrus sinensis; type=EST; length=677bpback to top |