CF834981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834981 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 1.057e-12 Identity = 26/48 (54.17%), Postives = 30/48 (62.50%), Query Frame = -3 Query: 170 KAIAVLDGSEGFKGTVSFYQEDGHHTVIAVNLANLKAGSHGFHVHESG 313 KA+AVL SEG GT+ F QE T + +LA LK G HGFHVH G Sbjct: 3 KAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALG 50 HSP 2 Score: 40.817 bits (94), Expect = 1.057e-12 Identity = 21/43 (48.84%), Postives = 26/43 (60.47%), Query Frame = -2 Query: 33 C*YSGKHFNPFNKSHSDIHGHEEHRHYGDLGNINVDYGDLGNI 161 C +G HFNP N H +E+RH GDLGN+NV GD G + Sbjct: 56 CLSTGAHFNPNNNEHGA--PEDENRHAGDLGNVNV--GDDGTV 94
BLAST of CF834981 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 51.9878 bits (123), Expect = 8.556e-12 Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = -3 Query: 170 KAIAVLDGSEGFKGTVSFYQE-DGHHTVIAVNLANLKAGSHGFHVHESG 313 KA+AVL SEG GT+ F QE +G T + +L+ LK G HGFHVH G Sbjct: 3 KAVAVLSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALG 51 HSP 2 Score: 38.891 bits (89), Expect = 8.556e-12 Identity = 20/44 (45.45%), Postives = 25/44 (56.82%), Query Frame = -2 Query: 30 C*YSGKHFNPFNKSHSDIHGHEEHRHYGDLGNINVDYGDLGNIK 161 C +G H+NP K H +EHRH GDLGN+ V G+ G K Sbjct: 57 CMSTGPHYNPHGKDHGA--PDDEHRHAGDLGNVTV--GEDGTAK 96
BLAST of CF834981 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 52.7582 bits (125), Expect = 1.874e-11 Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = -3 Query: 170 KAIAVLDGSEGFKGTVSFYQEDGHHTVIAVNLANLKAGSHGFHVHESG 313 KA+AVL SEG KGT+ F QE T + +++ LK G HGFHVH G Sbjct: 3 KAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALG 50 HSP 2 Score: 36.965 bits (84), Expect = 1.874e-11 Identity = 17/43 (39.53%), Postives = 24/43 (55.81%), Query Frame = -2 Query: 33 C*YSGKHFNPFNKSHSDIHGHEEHRHYGDLGNINVDYGDLGNI 161 C +G H+NP +K H +E+RH GDLGN+ + NI Sbjct: 56 CMSTGPHYNPASKEHGA--PEDENRHAGDLGNVTAGADGVANI 96
BLAST of CF834981 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.433e-11 Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = -3 Query: 170 KAIAVLDGSEGFKGTVSFYQEDGHHTVIAVNLANLKAGSHGFHVHESG 313 KA+AVL GSEG +GTV F QE T I +L+ LK G HGFHVH G Sbjct: 3 KAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALG 50 HSP 2 Score: 34.2686 bits (77), Expect = 2.433e-11 Identity = 16/35 (45.71%), Postives = 20/35 (57.14%), Query Frame = -2 Query: 57 C*YSGKHFNPFNKSHSDIHGHEEHRHYGDLGNINV 161 C +G HFNP K H + +RH GDLGN+ V Sbjct: 56 CMSTGPHFNPAGKEHG--APEDGNRHAGDLGNVTV 88
BLAST of CF834981 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 51.6026 bits (122), Expect = 2.433e-11 Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = -3 Query: 170 KAIAVLDGSEGFKGTVSFYQEDGHHTVIAVNLANLKAGSHGFHVHESG 313 KA+AVL SEG KGT+ F QE T + +++ LK G HGFHVH G Sbjct: 3 KAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALG 50 HSP 2 Score: 37.7354 bits (86), Expect = 2.433e-11 Identity = 18/43 (41.86%), Postives = 23/43 (53.49%), Query Frame = -2 Query: 33 C*YSGKHFNPFNKSHSDIHGHEEHRHYGDLGNINVDYGDLGNI 161 C +G HFNP K H +E+RH GDLGNI + N+ Sbjct: 56 CMSTGPHFNPTGKEHGA--PQDENRHAGDLGNITAGADGVANV 96
BLAST of CF834981 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 49.2914 bits (116), Expect = 3.159e-11 Identity = 23/48 (47.92%), Postives = 28/48 (58.33%), Query Frame = -3 Query: 170 KAIAVLDGSEGFKGTVSFYQEDGHHTVIAVNLANLKAGSHGFHVHESG 313 KA+AVL S GT++F QE T + LA LK G HGFH+H G Sbjct: 3 KAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALG 50 HSP 2 Score: 39.6614 bits (91), Expect = 3.159e-11 Identity = 22/43 (51.16%), Postives = 25/43 (58.14%), Query Frame = -2 Query: 33 C*YSGKHFNPFNKSHSDIHGHEEHRHYGDLGNINVDYGDLGNI 161 C +G HFNP K H +E RH GDLGNINV GD G + Sbjct: 56 CISTGPHFNPNGKEHGA--PEDETRHAGDLGNINV--GDDGTV 94
BLAST of CF834981 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 4.102e-11 Identity = 24/48 (50.00%), Postives = 29/48 (60.42%), Query Frame = -3 Query: 170 KAIAVLDGSEGFKGTVSFYQEDGHHTVIAVNLANLKAGSHGFHVHESG 313 KA+ VL SEG GTV F QE T + N++ L+ G HGFHVH G Sbjct: 3 KAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALG 50 HSP 2 Score: 36.5798 bits (83), Expect = 4.102e-11 Identity = 21/41 (51.22%), Postives = 23/41 (56.10%), Query Frame = -2 Query: 39 C*YSGKHFNPFNKSHSDIHGHEEHRHYGDLGNINVDYGDLG 161 C +G HFNP K H +E RH GDLGNI V GD G Sbjct: 56 CMSTGPHFNPAGKEHGA--PEDETRHAGDLGNITV--GDDG 92
BLAST of CF834981 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 51.6026 bits (122), Expect = 4.102e-11 Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = -3 Query: 170 KAIAVLDGSEGFKGTVSFYQEDGHHTVIAVNLANLKAGSHGFHVHESG 313 KA+AVL S+G KGT+ F QE T + +++ LK G HGFHVH G Sbjct: 3 KAVAVLGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALG 50 HSP 2 Score: 36.965 bits (84), Expect = 4.102e-11 Identity = 17/43 (39.53%), Postives = 24/43 (55.81%), Query Frame = -2 Query: 33 C*YSGKHFNPFNKSHSDIHGHEEHRHYGDLGNINVDYGDLGNI 161 C +G H+NP +K H +E+RH GDLGN+ + NI Sbjct: 56 CMSTGPHYNPASKEHGA--PEDENRHAGDLGNVTAGADGVANI 96 The following BLAST results are available for this feature:
BLAST of CF834981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834981 ID=CF834981; Name=CF834981; organism=Citrus sinensis; type=EST; length=411bpback to top |