CF835016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.531e-38 Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = -2 Query: 219 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 476 G+KFADENF+KKH GPGILSMANAGP T GSQFF+CTAKTEWLDGK VVFGQVVEGMDVVKAIEKVGSSSGRT K VV+ DCGQLS Sbjct: 87 GAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 8.698e-37 Identity = 71/86 (82.56%), Postives = 77/86 (89.53%), Query Frame = -2 Query: 219 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 476 G+KF DENF+KKH GPG+LSMANAGPGT GSQFF+CT KT WLDGK VVFGQVVEGMDVV+AIEKVGS SG+T KPV IADCGQLS Sbjct: 65 GAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.484e-36 Identity = 72/85 (84.71%), Postives = 77/85 (90.59%), Query Frame = -2 Query: 222 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 476 G+KF DENFVKKH GPGILSMANAGPGT GSQFF+CTAKTEWL+GK VVFGQVVEGMDV+K E VGSSSGR +KPVVIADCGQL Sbjct: 87 GAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.256e-35 Identity = 70/86 (81.40%), Postives = 76/86 (88.37%), Query Frame = -2 Query: 219 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 476 GSKF DENF +KH GPGILSMANAG T GSQFF+CT KT+WLDGK VVFGQVVEG+DVVKAIEKVGSSSG+ KPVV+ADCGQLS Sbjct: 87 GSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.654e-35 Identity = 67/86 (77.91%), Postives = 78/86 (90.70%), Query Frame = -2 Query: 219 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 476 G+KFADENF+K+H GPGILSMANAG GT GSQFF+CT KTEWLDGK VVFG+V+EGM+VV+ IEKVGS SG+T++PV IADCGQLS Sbjct: 87 GAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.654e-35 Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = -2 Query: 219 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 476 GSKF DENF+KKH GPGILSMANAG T GSQFF+CT KT WLDGK VVFGQVVEG++VV+ IEKVGS SGRT+KPVVIADCGQ+S Sbjct: 88 GSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.063e-34 Identity = 67/86 (77.91%), Postives = 76/86 (88.37%), Query Frame = -2 Query: 219 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 476 G+KF DENF +KH GPGILSMANAG T GSQFF+CT KT+WLDGK VVFGQVVEG+DVVKAIEK+GSSSG+ KPVVIADCG++S Sbjct: 88 GAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.005e-33 Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = -2 Query: 219 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 476 G+KF DENF+KKH G GILSMAN+GP T GSQFF+CT KT WLDGK VVFGQVV+G+DVVKAIEKVGS SG+T+K V I DCGQLS Sbjct: 87 GAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 7.620e-33 Identity = 67/85 (78.82%), Postives = 70/85 (82.35%), Query Frame = -2 Query: 222 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 476 G KF DENFVKKH GPGILSM NAG T GSQFF+CT KT WLDGK VVFGQVVEGMDVV+ IEKVGS SGRT+K VV DCGQL Sbjct: 87 GMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171
BLAST of CF835016 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.896e-32 Identity = 64/86 (74.42%), Postives = 70/86 (81.40%), Query Frame = -2 Query: 219 GSKFADENFVKKHPGPGILSMANAGPGTTGSQFFVCTAKTEWLDGKPVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 476 GS+F DENF KH GPG+LSMANAGP T GSQFF+CT KT+WLDGK VVFG V EGMDVVK IE GS SGRT+K +VI DCGQLS Sbjct: 122 GSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQLS 207 The following BLAST results are available for this feature:
BLAST of CF835016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835016 ID=CF835016; Name=CF835016; organism=Citrus sinensis; type=EST; length=477bpback to top |