CF835018

Overview
NameCF835018
Unique NameCF835018
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length458
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:1226..1682. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.942e-33
Identity = 74/111 (66.67%), Postives = 77/111 (69.37%), Query Frame = -2
Query:  125 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRS 457
            SKI+V AWWLANNPA WKN            E+KVEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ KI T+EKGGQFSLHILK   IVAK RS
Sbjct:  394 SKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRS 504          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.942e-33
Identity = 73/111 (65.77%), Postives = 76/111 (68.47%), Query Frame = -2
Query:  125 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRS 457
            SKI+V AWWLANNPA WKN             +KVEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ KI T+EKGGQFSLHILK   IVAK RS
Sbjct:  394 SKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRS 504          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 1.498e-32
Identity = 74/111 (66.67%), Postives = 75/111 (67.57%), Query Frame = -2
Query:  125 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRS 457
            SKI+V AWWLANNPAQWK             ES VEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ KI TAEKGGQFSLHILK   IV K RS
Sbjct:  393 SKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVCKPRS 503          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.337e-32
Identity = 73/111 (65.77%), Postives = 75/111 (67.57%), Query Frame = -2
Query:  125 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRS 457
            SKI+V AWWLANNPA WK             ES VEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ K+ TAEKGGQFSLHILK   IVAK RS
Sbjct:  394 SKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGGQFSLHILKHSTIVAKPRS 504          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.358e-32
Identity = 73/112 (65.18%), Postives = 75/112 (66.96%), Query Frame = -2
Query:  122 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRSL 457
            SKI+V AWWLANNP QWK             ESKVEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ K+ T EKGGQFSLHILK   IVAK R L
Sbjct:  394 SKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVDTTEKGGQFSLHILKHSTIVAKPRVL 505          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 5.692e-32
Identity = 73/111 (65.77%), Postives = 75/111 (67.57%), Query Frame = -2
Query:  125 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRS 457
            SKI+V AWWLANNP QWK             E+KVEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ KI T EKGGQFSLHILK   IVAK RS
Sbjct:  394 SKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGGQFSLHILKHSTIVAKPRS 504          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.656e-31
Identity = 72/111 (64.86%), Postives = 75/111 (67.57%), Query Frame = -2
Query:  125 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRS 457
            SKI+V AWWLANNPA WK             ES VEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ +I T+EKGGQFSLHILK   IVAK RS
Sbjct:  395 SKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPRS 505          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.656e-31
Identity = 71/111 (63.96%), Postives = 75/111 (67.57%), Query Frame = -2
Query:  125 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRS 457
            SKI+V AWWLANNPA WK             ES VEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ +I T+EKGGQFSLHILK   +VAK RS
Sbjct:  394 SKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTVVAKPRS 504          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 3.689e-31
Identity = 71/111 (63.96%), Postives = 75/111 (67.57%), Query Frame = -2
Query:  125 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRS 457
            SKI+V AWWLANNPA WK             E+ VEANGNDFRYLPFGVGRRSC              GRLVQNFELLPPPGQ KI T+EKGGQFSLHILK   IVAK R+
Sbjct:  394 SKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRA 504          
BLAST of CF835018 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.818e-31
Identity = 71/112 (63.39%), Postives = 74/112 (66.07%), Query Frame = -2
Query:  122 SKIIVKAWWLANNPAQWKNXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPPGQFKIATAEKGGQFSLHILKL*AIVAKHRSL 457
            SKI+V AWWLANNPA W              ESKVEANGNDF+Y+PFGVGRRSC              GRLVQNFELLPPPGQ KI TAEKGGQFSL ILK   IV K RSL
Sbjct:  395 SKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGGQFSLQILKHSTIVCKPRSL 506          
The following BLAST results are available for this feature:
BLAST of CF835018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
TCMO_POPTM3.942e-3366.67Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI3.942e-3365.77Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CICAR1.498e-3266.67Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_GLYEC3.337e-3265.77Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_ZINEL4.358e-3265.18Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_HELTU5.692e-3265.77Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_SOYBN1.656e-3164.86Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU1.656e-3163.96Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_PEA3.689e-3163.96Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_PETCR4.818e-3163.39Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835018 ID=CF835018; Name=CF835018; organism=Citrus sinensis; type=EST; length=458bp
GAATTTACACAAGTATTACATAACTACGCCCACTGCCACTTGATTTGAAC
CGACATTGAGGAAACCATTCAACCACTTTGAAACAGTCTTAACTTTACAA
CCAAATGGAATTGTGAAACTATAATGATCTATGCTTGGCAACAATGGCCT
AGAGCTTCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAGTGGCA
ATCTTAAATTGACCTGGAGGAGGCAAAAGCTCAAAGTTCTGTACCAAACG
CCCAATAATGATACCAAAAATTGGCAAAGCCAGGATAATTCCAGGGCAGC
TTCTTCTTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCATTAGCC
TCAACCTTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCTTCAGG
ATTCTTCCATTGGGCGGGATTGTTGGCGAGCCACCACGCCTTCACTATGA
TTTTGCTC
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