CF835206

Overview
NameCF835206
Unique NameCF835206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835206_ssr356 microsatellite CF835206_ssr356:356..379. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1381..1965. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.427e-25
Identity = 53/68 (77.94%), Postives = 58/68 (85.29%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W EKS+GKYEKKV VLPKHLDEKVAA HLGKLG KLT+L K+QA+YISV  +GPYKP  YRY
Sbjct:  418 IAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 7.427e-25
Identity = 53/68 (77.94%), Postives = 58/68 (85.29%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W EKS+GKYEKKV VLPKHLDEKVAA HLGKLG KLT+L K+QA+YISV  +GPYKP  YRY
Sbjct:  418 IAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.427e-25
Identity = 53/68 (77.94%), Postives = 58/68 (85.29%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W EKS+GKYEKKV VLPKHLDEKVAA HLGKLG KLT+L K+QA+YISV  +GPYKP  YRY
Sbjct:  418 IAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.161e-24
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQ+E WKEK++GKYEKKV VLPKHLDEKVAA HLG+LG KLT+L K+QA+YISV  +GPYKP  YRY
Sbjct:  418 IAQIELWKEKTSGKYEKKVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.161e-24
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W E+ TGKYEKKV VLPKHLDEKVAA HLGKLG KLT+L K+QA+YISV  +GPYKP  YRY
Sbjct:  418 IAQLELWNERKTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPIEGPYKPAHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.686e-24
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W E+++GKYEKKV VLPKHLDEKVAA HLGKLG KLT+L K+QA+YISV  +GPYKP  YRY
Sbjct:  418 IAQLELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.686e-24
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W EKS+GKYEKKV VLPKHLDEKVAA HLGKLG +LT+L K+Q++Y+S+  +GPYKP+ YRY
Sbjct:  418 IAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKPVHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.814e-24
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W EKS+GKYEKKV VLPKHLDEKVAA HL KLG KLT+L K+QA+YISV  +GPYKP  YRY
Sbjct:  418 IAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKPFHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.212e-24
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE WKE+++GKYEKKV VLPKHLDEKVAA HLGKLG KLT+L   QA+YISV  +GPYKP  YRY
Sbjct:  418 IAQLELWKERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTPSQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CF835206 vs. ExPASy Swiss-Prot
Match: SAHH_SOLLC (Adenosylhomocysteinase OS=Solanum lycopersicum GN=SAHH PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.389e-23
Identity = 50/68 (73.53%), Postives = 56/68 (82.35%), Query Frame = -1 
Query:  388 IAQLEFWKEKSTGKYEKKVCVLPKHLDEKVAAFHLGKLGGKLTRLPKEQAEYISVSADGPYKPLRYRY 591
            IAQLE W E+S+GKYEKKV VLPKHLDEKVAA HLGK G KLT+L K+QA+YI V  +GPYKP  YRY
Sbjct:  418 IAQLELWNERSSGKYEKKVYVLPKHLDEKVAALHLGKFGAKLTKLTKDQADYIYVPVEGPYKPAHYRY 485
The following BLAST results are available for this feature:
BLAST of CF835206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
SAHH_TOBAC7.427e-2577.94Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_PETCR7.427e-2577.94Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_NICSY7.427e-2577.94Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_MEDSA2.161e-2475.00Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_CATRO2.161e-2476.47Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_MESCR3.686e-2475.00Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH2_ARATH3.686e-2472.06Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_LUPLU4.814e-2476.47Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_PHASS8.212e-2475.00Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_SOLLC2.389e-2373.53Adenosylhomocysteinase OS=Solanum lycopersicum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835206 ID=CF835206; Name=CF835206; organism=Citrus sinensis; type=EST; length=591bp
TTTTTTTTTTTTTTTTTCATAATGATTTTTCATTTAAATAAGAAACTGCG
TATAAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGA
TAACAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAA
ATAATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCT
TCAAGCAAGGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCC
AAACACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATC
ATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACA
TTCACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGCGA
AGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTACTCAGCCTGCTC
CTTGGGGAGCCTGGTGAGCTTACCTCCAAGTTTGCCAAGGTGAAAAGCAG
CAACCTTTTCATCGAGGTGCTTGGGCAAAACGCACACCTTCTTCTCGTAC
TTGCCGGTGCTCTTCTCCTTCCAAAACTCAAGCTGGGCAAT
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