CF835274

Overview
NameCF835274
Unique NameCF835274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835274 vs. ExPASy Swiss-Prot
Match: WBS22_DICDI (Probable methyltransferase WBSCR22 homolog OS=Dictyostelium discoideum GN=DDB_G0269722 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.425e-48
Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 1
Query:  145 NRPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSRVNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 630
            +RPE IAPPEIFYDD E++KY+S+SRII+IQ K++ERA ELLA+P+     +LLDIGCGSG+SG+ +++ GH WIG DISQ  +++A++REVE              R G  D AISISA+QWLCNA+K+ H PR RL  FF SL+  L RG +A+ Q YPE
Sbjct:    2 SRPEHIAPPEIFYDDVESKKYSSNSRIIEIQTKMAERAYELLAIPETAEGLMLLDIGCGSGISGDVITDAGHYWIGCDISQHMLDVAIDREVEGDVMLRDIGQGFPFRAGSFDAAISISAIQWLCNAEKSHHNPRKRLHTFFQSLFNVLTRGGKAILQFYPE 163          
BLAST of CF835274 vs. ExPASy Swiss-Prot
Match: WBS22_MOUSE (Uncharacterized methyltransferase WBSCR22 OS=Mus musculus GN=Wbscr22 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.578e-47
Identity = 95/163 (58.28%), Postives = 113/163 (69.33%), Query Frame = 1
Query:  142 ANRPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSRVNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 630
            + RPE   PPE+FYD  EARKY  +SR+IDIQ K++ERALELL LP+ G P  LLDIGCGSGLSG+ +SE GH W+G+DIS + ++ AL+R+ E              RPG  DG ISISAVQWLCNA+K S  P  RL  FF SLY  L RGARAV Q+YPE
Sbjct:    5 SRRPEHSGPPELFYDQNEARKYVRNSRMIDIQTKMTERALELLCLPE-GQPSYLLDIGCGSGLSGDYISEEGHYWVGIDISPAMLDAALDRDTEGDLLLGDMGQGVPFRPGSFDGCISISAVQWLCNANKKSDVPARRLYCFFSSLYSALVRGARAVLQLYPE 166          
BLAST of CF835274 vs. ExPASy Swiss-Prot
Match: WBS22_HUMAN (Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens GN=WBSCR22 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 9.576e-45
Identity = 90/161 (55.90%), Postives = 113/161 (70.19%), Query Frame = 1
Query:  148 RPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSRVNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 630
            RPE   PPE+FYD+TEARKY  +SR+IDIQ +++ RALELL LP++  P  LLDIGCG+GLSG  LS+ GH W+GLDIS + ++ A++RE+E              +PG  DG ISISAVQWLCNA+K S  P  RL  FF SL+  L RG+RAV Q+YPE
Sbjct:    7 RPEHGGPPELFYDETEARKYVRNSRMIDIQTRMAGRALELLYLPENK-PCYLLDIGCGTGLSGSYLSDEGHYWVGLDISPAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFDGCISISAVQWLCNANKKSENPAKRLYCFFASLFSVLVRGSRAVLQLYPE 166          
BLAST of CF835274 vs. ExPASy Swiss-Prot
Match: WBS22_BOVIN (Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.806e-43
Identity = 87/161 (54.04%), Postives = 110/161 (68.32%), Query Frame = 1
Query:  148 RPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSRVNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 630
            RPEL  PPE++YD  EARKY  +SR+ID+Q K++ RALELL +P+D  P  +LDIGCG+GLSG+ LS+ GH W+G+DIS + ++ AL+RE +              +PG  D  ISISAVQWLCNA+K S  P  RL  FF SLY  L RG RAV Q+YPE
Sbjct:    7 RPELRGPPELYYDKNEARKYVRNSRMIDVQIKMTGRALELLCVPEDK-PCYVLDIGCGTGLSGDYLSDEGHYWVGIDISPAMLDEALDRETQGDVILGDMGQGIPFKPGTFDACISISAVQWLCNANKKSDIPAKRLYCFFSSLYSVLVRGGRAVLQLYPE 166          
BLAST of CF835274 vs. ExPASy Swiss-Prot
Match: BUD23_YEAST (Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae GN=BUD23 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.681e-38
Identity = 84/163 (51.53%), Postives = 106/163 (65.03%), Query Frame = 1
Query:  145 NRPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENG-HQWIGLDISQSRVNIALEREVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 630
            +RPE +APPEIFY+D+EA KYT S+R+  IQAK++ RALELL L        +LDIGCGSGLSGE L++ G H W GLDIS S +   L RE+E              R G  D AISISA+QWLCNAD + ++P+ RL  FF +LY  L +G + V Q YP+
Sbjct:    2 SRPEELAPPEIFYNDSEAHKYTGSTRVQHIQAKMTLRALELLNLQPCS---FILDIGCGSGLSGEILTQEGDHVWCGLDISPSMLATGLSRELEGDLMLQDMGTGIPFRAGSFDAAISISAIQWLCNADTSYNDPKQRLMRFFNTLYAALKKGGKFVAQFYPK 161          
BLAST of CF835274 vs. ExPASy Swiss-Prot
Match: YAU6_SCHPO (Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe GN=SPAC26A3.06 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.481e-37
Identity = 84/163 (51.53%), Postives = 107/163 (65.64%), Query Frame = 1
Query:  145 NRPELIAPPEIFYDDTEARKYTSSSRIIDIQAKLSERALELLALPDDGVPRLLLDIGCGSGLSGETLSENGHQWIGLDISQSRVNIALE-REVEXXXXXXXXXXXXXXRPGVVDGAISISAVQWLCNADKASHEPRLRLKAFFGSLYRCLARGARAVFQIYPE 630
            +RPE IAPPEIFY+D EA KY++++RI  IQ ++SERALELL   D   P  +LDIGCGSG+S +     GH  +G+DIS S +++ALE +E+E              RPG  DG ISISA+QWL NADK  + P+ RL  FF +LY  + RG RAV Q YPE
Sbjct:    2 SRPEHIAPPEIFYNDVEAGKYSTNTRIQSIQTEMSERALELL---DAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQEIEGDLLLCDMGTGVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGRAVMQYYPE 161          
The following BLAST results are available for this feature:
BLAST of CF835274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
WBS22_DICDI5.425e-4855.56Probable methyltransferase WBSCR22 homolog OS=Dict... [more]
WBS22_MOUSE1.578e-4758.28Uncharacterized methyltransferase WBSCR22 OS=Mus m... [more]
WBS22_HUMAN9.576e-4555.90Uncharacterized methyltransferase WBSCR22 OS=Homo ... [more]
WBS22_BOVIN1.806e-4354.04Uncharacterized methyltransferase WBSCR22 OS=Bos t... [more]
BUD23_YEAST8.681e-3851.53Putative methyltransferase BUD23 OS=Saccharomyces ... [more]
YAU6_SCHPO1.481e-3751.53Putative methyltransferase C26A3.06 OS=Schizosacch... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06P06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835274 ID=CF835274; Name=CF835274; organism=Citrus sinensis; type=EST; length=630bp
GGGNTGCAGGGNTCACTTGGCCCTTTTAAGCCCTCATTGCTTCAACCATA
AATTACAAAATTCTTTATCGTTTCAAAAACCCTTAATTTCACAGCTCTTT
AACGCATCTTTTATTATTTCAGCTATTATTTACAGGAGATGGCGAACCGA
CCGGAGTTAATAGCGCCACCTGAGATATTCTATGATGATACTGAAGCTCG
GAAATACACGTCCTCTTCTCGTATCATCGACATTCAGGCAAAGCTTTCGG
AGAGAGCATTAGAGCTGCTTGCTTTGCCTGATGATGGGGTCCCCAGATTA
CTTCTTGATATCGGTTGTGGATCAGGTCTTAGTGGTGAGACACTATCTGA
GAACGGGCACCAATGGATTGGTCTAGACATTTCCCAGTCGAGGGTTAATA
TTGCTTTGGAGCGAGAGGTTGAGGGCGATCTATTACTTGGAGACATGGGT
CAGGGCTTGGGACTTCGGCCTGGAGTTGTTGACGGGGCCATCAGTATATC
GGCTGTTCAGTGGTTATGTAATGCTGACAAGGCCTCACATGAGCCACGAT
TAAGATTGAAGGCTTTCTTTGGGTCATTATATAGATGCTTGGCGAGGGGA
GCAAGAGCAGTATTTCAGATATATCCTGAA
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