CF835281 | Citrus Genome Database

Overview


Name	CF835281
Unique Name	CF835281
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	630

Libraries


Library Name	Type
Ruby Orange Ovary at Anthesis cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig940	contig	Csv1_Contig940:22..650.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 1.898e-58
Identity = 112/171 (65.50%), Postives = 133/171 (77.78%), Query Frame = 1

Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S S AQL+P+FY +TCP+V  I+ D +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK AAPN NSARGF VID MKAAVE AC R VSCADILTIAA+++V L+GGPSW VPLGRRDS  A  ALAN NLP P  +L +LK+SF+NVGL+   DLVAL
Sbjct:   25 SISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVAL 195

HSP 2 Score: 26.5646 bits (57), Expect = 1.898e-58
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SG HTFG+ QC+F
Sbjct:  192 LVALSGGHTFGKNQCQF 208

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 2.474e-58
Identity = 112/171 (65.50%), Postives = 130/171 (76.02%), Query Frame = 1

Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S S AQL+P+FY ++CPNV NI+ D +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVE AC R VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP P  +L +LK SFRNVGLN   DLVAL
Sbjct:   26 SLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVAL 196

HSP 2 Score: 26.9498 bits (58), Expect = 2.474e-58
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SG HTFG+ QC+F
Sbjct:  193 LVALSGGHTFGKNQCRF 209

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.208e-58
Identity = 109/169 (64.50%), Postives = 132/169 (78.11%), Query Frame = 1

Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S AQL+P+FY ++CPNV NI+ D++     SD  I AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF V+D +KAAVE+AC R VSCAD+LTIAA++SV L+GGPSW VPLGRRDSR A   LAN NLP PS +L ELK++F NVGLN   DLVAL
Sbjct:    7 SNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVAL 175

HSP 2 Score: 26.9498 bits (58), Expect = 4.208e-58
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SG HTFG+ QC+F
Sbjct:  172 LVALSGGHTFGKNQCRF 188

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.585e-57
Identity = 108/171 (63.16%), Postives = 129/171 (75.44%), Query Frame = 1

Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S S AQLSPSFY  TCP V +I+ + +  A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+VID MKAA+EKAC R VSCAD+L IAA+ S+ L+GGPSW VP GRRDS      LAN NLPGPS++L +LK  F+NVGL+   DLVAL
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVAL 188

HSP 2 Score: 27.7202 bits (60), Expect = 1.585e-57
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SG HTFG++QC+F
Sbjct:  185 LVALSGGHTFGKSQCQF 201

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 3.511e-57
Identity = 110/171 (64.33%), Postives = 131/171 (76.61%), Query Frame = 1

Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S S AQL+P+FY  +CPNV NI+ + +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVE+AC R VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP P  +L +LK+SFRNVGL+   DLVAL
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVAL 196

HSP 2 Score: 26.5646 bits (57), Expect = 3.511e-57
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SG HTFG+ QC+F
Sbjct:  193 LVALSGGHTFGKNQCQF 209

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 3.511e-57
Identity = 110/171 (64.33%), Postives = 128/171 (74.85%), Query Frame = 1

Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S S AQLSPSFY  TCP V +I  + +K A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N  SARGF+VID MKAAVEKAC + VSCAD+L IAA++SV L+GGPSW VP GRRDS      LAN NLPGPS++L  LK  FRNVGL+   DLVAL
Sbjct:   20 SLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVAL 190

HSP 2 Score: 26.5646 bits (57), Expect = 3.511e-57
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SG HTFG+ QC+F
Sbjct:  187 LVALSGGHTFGKNQCQF 203

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.322e-56
Identity = 106/169 (62.72%), Postives = 129/169 (76.33%), Query Frame = 1

Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S AQL+P+FY ++CP V NI+ D +     SD RI  S++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVE+AC R VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP P  +L +LK++F+NVGL+   DLVAL
Sbjct:   29 SDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVAL 197

HSP 2 Score: 28.4906 bits (62), Expect = 1.322e-56
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SGAHTFG+ QC+F
Sbjct:  194 LVALSGAHTFGKNQCRF 210

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.980e-56
Identity = 107/173 (61.85%), Postives = 128/173 (73.99%), Query Frame = 1

Query:   70 EGSPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            + S S AQL P FY  TCP + NII D +     +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NS RGF+VID MKAA+E+AC R VSCADI+TIA++ SV LSGGP W VPLGRRDS  A  ALAN  LP P ++L +LK++F +VGLN   DLVAL
Sbjct:   23 QASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVAL 195

HSP 2 Score: 28.8758 bits (63), Expect = 4.980e-56
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SG HTFG+AQC+F
Sbjct:  192 LVALSGGHTFGKAQCQF 208

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.190e-55
Identity = 108/172 (62.79%), Postives = 127/172 (73.84%), Query Frame = 1

Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT-IDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S S AQLS +FYS+TCPNV  I+  V+++A  +D RIG SLIRLHFHDCFVDGCD S+LLD+  T I SEK A PN NS RGF+V+DN+K AVE AC  VVSC DIL +A+E SV+L+GGPSW V LGRRD RTAN+  AN +LP P  +L  L   F NVGLN   DLVAL
Sbjct:   19 SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVN-DLVAL 189

HSP 2 Score: 29.6462 bits (65), Expect = 3.190e-55
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCK 625
            L+  SGAHTFGRAQC+
Sbjct:  186 LVALSGAHTFGRAQCR 201

[Close]

BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 7.062e-55
Identity = 105/171 (61.40%), Postives = 129/171 (75.44%), Query Frame = 1

Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S S AQL+P+FY ++CPNV NI+ D++     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF  +D +KAAVE+AC R VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP P  +L +LK +F  VGL+   DLVAL
Sbjct:   24 SLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVAL 194

HSP 2 Score: 26.9498 bits (58), Expect = 7.062e-55
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2

Query:  578 LLHSSGAHTFGRAQCKF 628
            L+  SG HTFG+ QC+F
Sbjct:  191 LVALSGGHTFGKNQCRF 207

The following BLAST results are available for this feature:

BLAST of CF835281 vs. ExPASy Swiss-Prot

BLAST of CF835281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109


Match Name	E-value	Identity	Description
PER32_ARATH	1.898e-58	65.50	Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=...	[more]
PER1A_ARMRU	2.474e-58	65.50	Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE...	[more]
PER1C_ARMRU	4.208e-58	64.50	Peroxidase C1C (Fragment) OS=Armoracia rusticana G...	[more]
PER38_ARATH	1.585e-57	63.16	Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=...	[more]
PER34_ARATH	3.511e-57	64.33	Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=...	[more]
PER2_ARMRU	3.511e-57	64.33	Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3...	[more]
PER33_ARATH	1.322e-56	62.72	Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=...	[more]
PER23_ARATH	4.980e-56	61.85	Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=...	[more]
PER15_IPOBA	3.190e-55	62.79	Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1	[more]
PER1B_ARMRU	7.062e-55	61.40	Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE...	[more]

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Properties


Property Name	Value
Genbank description	UCRCS02_06P10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P10, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF835281 ID=CF835281; Name=CF835281; organism=Citrus sinensis; type=EST; length=630bp
AGTACTCTTAGCCAAATGGCTTCACTTCGTTATCTTCTTCCATTAGCTCT
TGTTGTTGCTTTTGTGCTTGAGGGATCACCCTCTCAAGCTCAACTTTCTC
CATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACATTATCGAGGAT
GTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCAT
CAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCTTCGATTT
TGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAAT
AATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGT
TGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTG
CGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCA
TTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAA
TCTTCCAGGACCATCTAATTCTCTTGATGAGCTCAAATCTAGTTTTAGAA
ATGTTGGCCTCAATGACAAGTTTGATCTTGTTGCACTCCTCCGGAGCTCA
CACGTTTGGAAGGGCTCAGTGCAAATTTTT