CF835339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.760e-59 Identity = 104/118 (88.14%), Postives = 108/118 (91.53%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 +DY FHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIREEIAQIE G DI+NNVLKGAPHPPS+LM D WTKPYSREYAAYPA WLR AKFWP TGRVDNVYGDRNLICTLLP Sbjct: 906 IDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNVDINNNVLKGAPHPPSMLMADAWTKPYSREYAAYPAPWLRSAKFWPTTGRVDNVYGDRNLICTLLP 1023
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.094e-58 Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 MDY FHGPTMSWPV GTLMIEPTESESK ELDR+CDALISIR+EIA++E G AD+HNNVLKGAPHPPSLLM D WTKPYSREYAA+PA+WLR AKFWP TGRVDNVYGDRNL+CTLLP Sbjct: 927 MDYGFHGPTMSWPVAGTLMIEPTESESKAELDRFCDALISIRKEIAEVEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAAWLRGAKFWPTTGRVDNVYGDRNLVCTLLP 1044
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.437e-58 Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 MDY FHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIREEIAQIE G AD+ NNVLKGAPHPPSLLM DTW KPYSREYAA+PA WLR +KFWP TGRVDNVYGDR L+CTLLP Sbjct: 909 MDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNADVQNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRKLVCTLLP 1026
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.063e-57 Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 MDY FHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIREEI+QIE G AD +NNVLKGAPHPPSLLM DTW KPYSREYAA+PA WLR +KFWP TGRVDNVYGDRNL+CTL P Sbjct: 915 MDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEISQIEKGNADPNNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRNLVCTLQP 1032
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 6.636e-56 Identity = 98/118 (83.05%), Postives = 105/118 (88.98%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 +DY FHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIR+EIA+IE G D++NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P Sbjct: 908 IDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDLNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1025
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.132e-55 Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 +DY FHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIR+EIA+IE G D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P Sbjct: 905 IDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.132e-55 Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 +DY FHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIR+EIA+IE G D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P Sbjct: 905 IDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.478e-55 Identity = 98/118 (83.05%), Postives = 104/118 (88.14%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 +DY FHGPTMSWPVPGTLMIEPTESESK ELDR+CDALISIR+EIA+IE G D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P Sbjct: 905 IDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGTVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQP 1022
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSP_NOSP7 (Glycine dehydrogenase [decarboxylating] OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gcvP PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 8.414e-43 Identity = 77/118 (65.25%), Postives = 91/118 (77.12%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 355 MDY FH PT+SWPV GT+M+EPTESESK+ELDR+CDALI+IR+EIA+IE GK D +NVLK APH L+ W PYSRE AAYPA W R KFWPA GR+D +GDRN +C+ LP Sbjct: 856 MDYGFHAPTVSWPVGGTIMVEPTESESKQELDRFCDALIAIRQEIAEIEVGKVDAQDNVLKNAPHTAESLITGEWQHPYSREQAAYPAPWTREYKFWPAVGRIDAAFGDRNFVCSCLP 973
BLAST of CF835339 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.435e-42 Identity = 77/115 (66.96%), Postives = 90/115 (78.26%), Query Frame = 2 Query: 2 MDYAFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICT 346 MDY FH PT+SWPVPGTLMIEPTESE+K ELDR+C+A+I+IR EIA+IE G +D N LK APHP +L + W PYSRE AAYPA WLR KFWPA R+DN YGDR+L+CT Sbjct: 833 MDYGFHAPTVSWPVPGTLMIEPTESETKAELDRFCEAMIAIRSEIAEIEAGVSDRQQNPLKNAPHPALMLATEPWPYPYSREVAAYPAPWLREYKFWPAVARIDNAYGDRHLVCT 947 The following BLAST results are available for this feature:
BLAST of CF835339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 252
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835339 ID=CF835339; Name=CF835339; organism=Citrus sinensis; type=EST; length=614bpback to top |