CF835349

Overview
NameCF835349
Unique NameCF835349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13382 contig Csv1_Contig13382:28..855. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.641e-86
Identity = 158/198 (79.80%), Postives = 169/198 (85.35%), Query Frame = -1
Query:  233 LEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 826
            LEK+A                 LKK FYG+KGP FGTKV+NYPPCPK DLIKGLRAHTDAGGIILLFQDD+VSGLQLLKDDQW+DVPPMKHSIVINLGDQLEVITNGKYKSVLHRV+AQT+G RMSIASFYNPG+DAVIYPAPALVEKE    +VYPKFVF+DYMKLYA LKFQAKEPRFEAMK +E  VNLGPIATV
Sbjct:  121 LEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAKEPRFEAMKAVEANVNLGPIATV 318          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 4.774e-86
Identity = 158/200 (79.00%), Postives = 172/200 (86.00%), Query Frame = -1
Query:  233 ELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 829
            +LEK+A                 LKK FYGSKGPTFGTKVSNYPPCP+P+LIKGLRAHTDAGGIILLFQD++VSGLQLLKD +W+DVPPMKHSIVIN+GDQLEVITNGKYKSV+HRVIAQ +GNRMSIASFYNPGSDAV+YPAPALV+KE     QVYPKFVFEDYMKLYAGLKFQAKEPRFEAMK ME  VNLGPIAT+
Sbjct:  120 KLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKAMENAVNLGPIATI 319          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.814e-85
Identity = 159/199 (79.90%), Postives = 169/199 (84.92%), Query Frame = -1
Query:  233 LEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 826
            LEK+A                 LK  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQ +G RMS+ASFYNPGSDAVIYPAPALVEKEA  N QVYPKFVF+DYMKLYAGLKFQAKEPRFEAMK MET V + PIATV
Sbjct:  121 LEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV 319          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.421e-84
Identity = 156/199 (78.39%), Postives = 168/199 (84.42%), Query Frame = -1
Query:  233 LEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIATV 826
            LEK+A                 LKK FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKDDQW+DVPPM+HSIVINLGDQLEVITNGKYKSV HRVIAQT+G RMS+ASFYNP SDAVIYPAPALVE++A  N Q+YPKFVF+DYMKLYA LKFQAKEPRFEAMK ME  V + P+ATV
Sbjct:  121 LEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDYMKLYARLKFQAKEPRFEAMKAMEADVKIDPVATV 319          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.300e-83
Identity = 157/199 (78.89%), Postives = 165/199 (82.91%), Query Frame = -1
Query:  236 LEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVN--SQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 826
            LEK+A                 LKK FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD QW+DVPPM+HSIV+NLGDQLEVITNGKYKSVLHRVIAQT+G RMS+ASFYNPGSDAVIYPAP LVEKEA     QVYPKFVF+DYMKLYAGLKFQAKEPRFEAMK  E  V   PIAT
Sbjct:  121 LEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAREADVKSDPIAT 319          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.300e-83
Identity = 155/200 (77.50%), Postives = 170/200 (85.00%), Query Frame = -1
Query:  233 ELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNME-TIVNLGPIATV 829
            ELEK+A                 LKKVFYGSKGP FGTKVSNYPPCPKP+LIKGLRAHTDAGG+ILLFQDD+VSGL +LKD +WVDVPPM HSIVINLGDQLEVITNGKYKSV+HRVIAQ +GNRMSIASFYNPG+DAVIYPAPALVE E   +++YPKFVF+DYMKLY GLKFQAKEPRFEAMK ME T +N+GPIATV
Sbjct:  121 ELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGNRMSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKLYVGLKFQAKEPRFEAMKAMESTNLNMGPIATV 320          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.101e-82
Identity = 154/199 (77.39%), Postives = 168/199 (84.42%), Query Frame = -1
Query:  236 ELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEA-VNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 829
            +LEK+A                 LKK FYG+ GPTFGTKVSNYPPCP P+LIKGLRAHTDAGG+ILLFQDD+VSGLQLLKD QW+DVPPM+HSIVINLGDQLEVITNGKY+SV HRVIAQT+G RMSIASFYNPGSDAVIYPAP LVEKEA   +QVYPKFVFEDYMKLYAGLKFQ KEPRFEAMK +ET ++L PIAT
Sbjct:  120 KLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMKLYAGLKFQPKEPRFEAMKAVETNISLVPIAT 318          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 303.908 bits (777), Expect = 7.133e-82
Identity = 152/189 (80.42%), Postives = 162/189 (85.71%), Query Frame = -1
Query:  263 LEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNS-QVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMET 826
            LEK+A                 LK  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD+QW+DVPPM+HSIV+NLGDQLEVITNGKYKSVLHRVIAQT+G RMS+ASFYNPGSDAVIYPA  LVEKEA  S QVYPKFVF+DYMKLYAGLKFQAKEPRFEAMK ME+
Sbjct:  121 LEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMES 309          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.030e-80
Identity = 147/174 (84.48%), Postives = 153/174 (87.93%), Query Frame = -1
Query:  236 KKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPIAT 757
            K  FYG+ GPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD  WVDVPPMKHSIV+NLGDQLEVITNGKYKSV+HRVIAQT+GNRMSIASFYNPGSDAVIYPAP LVEKE    + YPKFVFEDYM LY  LKFQ KEPRFEAMK MET    GPI T
Sbjct:  150 KNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLKFQEKEPRFEAMKAMET---TGPIPT 320          
BLAST of CF835349 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.997e-80
Identity = 147/192 (76.56%), Postives = 162/192 (84.38%), Query Frame = -1
Query:  251 LEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNL 826
            LEK+A                 LK  FYGSKGP FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDD+VSGLQLLKD+QW+DVPPM+HSIV+NLGDQLEVITNGKYKSV+HRVIAQT+G RMS+ASFYNPG+DAVIYPAP+L+E+   + QVYPKFVF+DYMKLYAGLKFQ KEPRFEAMK ME  V L
Sbjct:  121 LEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEE---SKQVYPKFVFDDYMKLYAGLKFQPKEPRFEAMKAMEANVEL 309          
The following BLAST results are available for this feature:
BLAST of CF835349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCO_DIOKA1.641e-8679.801-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_ACTDE4.774e-8679.001-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO1_PETHY1.814e-8579.901-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO4_PETHY3.421e-8478.391-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_PETHY1.300e-8378.891-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO3_CUCME1.300e-8377.501-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_PRUMU1.101e-8277.391-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO1_SOLLC7.133e-8280.421-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_DIACA1.030e-8084.48Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO4_SOLLC2.997e-8076.561-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01B13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01B13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835349 ID=CF835349; Name=CF835349; organism=Citrus sinensis; type=EST; length=829bp
TTTTTTTTTTTTTTTTAATCTTATATAATTTCATATGAAACACGATGAAT
ACAGTATTCCATTTGGTCACTTTCTACAATAAATACCTGAAACACCACAA
CCACCGTCGACTTTGACTCCACAAGAACTATGATCAGTCCGAGCTTTCGG
CTTATTTTAAAAACTATATATGTTCCACACTAGCCAACACAAACAACTCA
GCTCTAACACCAAAGAGCCATAGGGGAACTCAAACAGTTGCAATAGGACC
CAGATTCACAATGGTCTCCATGTTCTTCATGGCTTCAAACCTTGGCTCCT
TGGCCTGAAACTTCAGCCCAGCATAGAGTTTCATGTAATCCTCGAACACA
AATTTCGGATAAACTTGGCTGTTCACAGCCTCCTTCTCCACCAATGCTGG
TGCCGGGTAGATCACAGCATCACTGCCTGGATTGTAAAATGATGCTATGG
ACATCCTGTTACCCTCTGTTTGAGCAATCACGCGATGTAGCACACTCTTG
TACTTGCCATTGGTTATCACCTCAAGTTGGTCACCGAGGTTGATGACAAT
GGAGTGTTTCATGGGTGGAACATCAACCCATTGGTCATCTTTGAGCAGCT
GGAGGCCACTGACTTCGTCATCTTGAAAGAGCAAGATGATGCCACCAGCA
TCAGTATGGGCCCTAAGTCCCTTGATCAGATCTGGTTTTGGGCATGGAGG
GTAATTGCTGACCTTGGTGCCAAAGGTTGGTCCTTTGGACCCATAAAACA
CTTTCTTCAAATACCCTTCCTCCAGCCCAAGATTCTCACACAACAATTCC
AGAAGTTGCTCAGCAACCTTCTCCAATTC
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