CF835466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.428e-29 Identity = 81/155 (52.26%), Postives = 99/155 (63.87%), Query Frame = -3 Query: 170 ELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDESNISHQVPPHRL----PWEASSPRQNIPSNRYPFQSEGFFQPLSGGNPILQIGY-NPMGSEE--AHIPVHAQNVTGFIPGWML 613 E LQR QRNLLGEDL PL++KELEQL+ QL+ SLK VRS KTQ +DQLSDLQ +EQ+LLE N+AL LD+ V H + WE QN+ + QS+G +QPL NP LQ+GY NP+ SE+ A AQ G+IPGWML Sbjct: 103 ENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDD---MIGVRSHHMGGGGGWEGG--EQNVTYAHHQAQSQGLYQPLE-CNPTLQMGYDNPVCSEQITATTQAQAQQGNGYIPGWML 251
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.580e-28 Identity = 73/150 (48.67%), Postives = 92/150 (61.33%), Query Frame = -3 Query: 170 VELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDESNISHQVPPHRLPWEASSPRQNIPSNRYPFQSEGFFQPLS-GGNPILQIGYNPMGSEEAHIPVHAQNVTGFIPGWML 616 V++LQR RNLLGEDL LSTKELEQL+HQL+ SL+ +RS KTQ +DQL+DLQK+E++L E N+AL L+ES S R W+ P +GFF+PL N LQIGYN ++ + AQNV GF GWML Sbjct: 101 VDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEESCAS-----FRPNWDVRQP------------GDGFFEPLPLPCNNNLQIGYNEATQDQMNATTSAQNVHGFAQGWML 233
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.282e-26 Identity = 75/155 (48.39%), Postives = 95/155 (61.29%), Query Frame = -3 Query: 173 VELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDESNISH-QVPPH---RLPWEASSPR--QNIPSNRYPFQSEGFFQPL-SGGNPILQIGYNPMGSEEAHIPVHAQNVTGFIPGWM 616 VE LQR QRNLLGEDL L KELEQL+ QL++SL+H+RST+TQ +DQL+DLQ+REQ+L E NK L + L+ESN H QV H L +E SP Q +P P GFF L + P LQIG+ P ++ VT F+P W+ Sbjct: 104 VENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGATLLGYERQSPHAVQQVP----PHGGNGFFHSLEAAAEPTLQIGFTPE-------QMNNSCVTAFMPTWL 247
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.247e-25 Identity = 76/154 (49.35%), Postives = 97/154 (62.99%), Query Frame = -3 Query: 170 ELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKAL-MKNLDESNISHQVPPHRL--PWEASSPRQNIPSNRYPFQSEGFFQPLSGGNPILQIGY-NPMGSEEAHIPVHAQNV--TGFIPGWML 613 E LQR QRNLLGEDL PL++KELEQL+ QL+ SLK VR KTQ +DQLSDLQ +E +LL+ N+AL MK D + H H + WE +QNI S+G +Q L +P LQIGY +P+ SE+ + V Q+ G+IPGWML Sbjct: 103 ENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH----HHIGGGWEGGD-QQNIAYGHPQAHSQGLYQSLE-CDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWML 250
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.379e-24 Identity = 69/151 (45.70%), Postives = 95/151 (62.91%), Query Frame = -3 Query: 173 VELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDESNISHQVPPHRLPWEASSPRQNIPSNRYPFQ--SEGFFQPLSGGNPILQIGYNPMGSEEAHIPVHAQNVTGFI-PGWM 616 VE LQR QRNLLGEDL PL +KELEQL+ QL++SL+ +RST+TQ +DQL+DLQ+REQ+L E NK L + +ES+ ++Q + W+ S+ + R P Q E F+ PL P LQIGY+ S+ A V ++ PGW+ Sbjct: 101 VEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQ----QQVWDPSNTHA-VGYGRQPAQHHGEAFYHPLE-CEPTLQIGYH---SDITMATATASTVNNYMPPGWL 242
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 5.794e-23 Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = -3 Query: 173 VELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDESN--ISHQVPPHRLPWEASS---PRQNIPSNRYPFQ-SEGFFQPL-SGGNPILQIGYNPMGSEEAHIPVHAQNVTGFIPGWM 616 VE LQR QRNLLGEDLD L KELE L+ QL++SLKHVR+T+T+ VDQL++LQ++EQ++ E N+ L + L+ESN QV WE + P + P GFF PL + G P LQIGY E H +++ + ++P W+ Sbjct: 104 VENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQV------WEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY----PAEHHEAMNSACMNTYMPPWL 248
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 5.794e-23 Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = -3 Query: 173 VELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDESN--ISHQVPPHRLPWEASS---PRQNIPSNRYPFQ-SEGFFQPL-SGGNPILQIGYNPMGSEEAHIPVHAQNVTGFIPGWM 616 VE LQR QRNLLGEDLD L KELE L+ QL++SLKHVR+T+T+ VDQL++LQ++EQ++ E N+ L + L+ESN QV WE + P + P GFF PL + G P LQIGY E H +++ + ++P W+ Sbjct: 104 VENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHVRGQQV------WEQGCNLIGYERQPEVQQPLHGGNGFFHPLDAAGEPTLQIGY----PAEHHEAMNSACMNTYMPPWL 248
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 5.794e-23 Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = -3 Query: 170 VELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDE-----------SNISHQVPPHRLPWEASSPRQNIPSNRYPFQSEGFFQPLSGGNPILQIG--YNPMGSEEAHIPVHAQNVTGFIPGWML 616 VE+LQ QR+LLGE+L + ELE L+ Q++ SL+ +RSTK + +DQLSDL+ +E++LLE N+ L + L++ S+ + Q H+ + S Q+ P P Q GFF+PL GN LQ+ YN + + +QNV GF PGWM+ Sbjct: 102 VEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAALTQSFWGSSAAEQQQQHQQQQQGMSSYQSNP----PIQEAGFFKPLQ-GNVALQMSSHYNHNPANATNSATTSQNVNGFFPGWMV 258
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.093e-21 Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = -3 Query: 173 ELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDESNISHQVPPHRLPWEASSPRQNIPSNRYPFQSEGFFQPLSGGNPILQIGYNPMGSEEAHIPVHAQNVTGFIPGWM 613 E LQR QRNLLGEDL PL++KELE L+ QL+ SLK +RST+TQ +DQL DLQ++E L E N+ L + L E + + L W+ ++ Q +GFF PL P LQIGY ++ + +V ++ GW+ Sbjct: 104 EALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLN------LQWQQNAQDVGYGRQATQTQGDGFFHPLE-CEPTLQIGYQ---NDPITVGGAGPSVNNYMAGWL 240
BLAST of CF835466 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.179e-21 Identity = 62/147 (42.18%), Postives = 85/147 (57.82%), Query Frame = -3 Query: 173 ELLQRCQRNLLGEDLDPLSTKELEQLDHQLETSLKHVRSTKTQCTVDQLSDLQKREQVLLELNKALMKNLDESNISHQVPPHRLPWEASSPRQNIPSNRYPFQSEGFFQPLSGGNPILQIGYNPMGSEEAHIPVHAQNVTGFIPGWM 613 + LQR QRNLLGEDL PLSTKELE L+ QL++SLK +R+ +TQ +DQL+DLQ +E++L E NK L L + +Q+P P + ++ S+ FFQPL PILQIGY P +V ++ GW+ Sbjct: 106 DALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD---GYQMPLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLE-CEPILQIGYQGQQDGMGAGP----SVNNYMLGWL 244 The following BLAST results are available for this feature:
BLAST of CF835466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835466 ID=CF835466; Name=CF835466; organism=Citrus sinensis; type=EST; length=621bpback to top |