CF835474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835474 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.979e-61 Identity = 115/130 (88.46%), Postives = 124/130 (95.38%), Query Frame = -3 Query: 352 GNNSVALGTDLSFDTATGNFTKCNAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQHEWRPKSLFTISGEVDTRAIEKS 741 GNN+VALGTDLSFDTATGNFTKCNAGLS++ DLIASL LNDKGDT++ASYYH V P+TNTAVGAELTHSFSSNENTLTIGTQH LDPLT+VKARVN+YG+ASALIQHEWRPKSLFTISGEVDTRAIEKS Sbjct: 136 GNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKS 265
BLAST of CF835474 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 8.054e-55 Identity = 97/129 (75.19%), Postives = 118/129 (91.47%), Query Frame = -3 Query: 355 GNNSVALGTDLSFDTATGNFTKCNAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQHEWRPKSLFTISGEVDTRAIEK 741 G N +ALGTD+SFDT TG+FTKCNAGLS+T+ DL+ASL LN+KGD L ASYYH VSPLT+TAVGAE+ HSFS+NEN +T+GTQH LDPLTSVKAR+NN+G+ASAL+QHEWRPKSLFT+SGEVDT++++K Sbjct: 136 GTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDK 264
BLAST of CF835474 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 202.601 bits (514), Expect = 1.857e-51 Identity = 97/130 (74.62%), Postives = 117/130 (90.00%), Query Frame = -3 Query: 352 GNNSVALGTDLSFDTATGNFTKCNAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQHEWRPKSLFTISGEVDTRAIEKS 741 G+N +A+GTD+SFDT +GNFTK NAGLS+T DLIASLT+NDKGD LNASYYHIV+PL NTAVGAE++H SS ++T+T+GTQH+LDPLTSVKARVN+ G ASALIQHEW+PKS FTISGEVDT++I+KS Sbjct: 136 GSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKS 265
BLAST of CF835474 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 187.963 bits (476), Expect = 4.733e-47 Identity = 94/130 (72.31%), Postives = 112/130 (86.15%), Query Frame = -3 Query: 352 GNNSVALGTDLSFDTATGNFTKCNAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQHEWRPKSLFTISGEVDTRAIEKS 741 G ++A+G D+S DTATGN TK NAGLS+++ DLIASL LN+KGD+L ASYYHIV+ + TAVGAELTHSFSSNEN+LT GTQH LDPLT VKAR NN G+ASAL+QHEWRPKS++TIS EVDT+AI+KS Sbjct: 135 GTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNH-SATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKS 263
BLAST of CF835474 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 3.068e-46 Identity = 87/130 (66.92%), Postives = 106/130 (81.54%), Query Frame = -3 Query: 352 GNNSVALGTDLSFDTATGNFTKCNAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQHEWRPKSLFTISGEVDTRAIEKS 741 G N++A G D+SFDT G TK NA +++ DLI SLTLN+KGD L+ASYYH ++PL+NTAVG +++H FS+ ENT T+GTQHALDPLT+VK RV N G+ASALIQHEWRPKSL TIS EVDT+AIEKS Sbjct: 136 GTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKS 265
BLAST of CF835474 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.232e-46 Identity = 95/130 (73.08%), Postives = 109/130 (83.85%), Query Frame = -3 Query: 352 GNNSVALGTDLSFDTATGNFTKCNAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQHEWRPKSLFTISGEVDTRAIEKS 741 G +++A+G D+S DTAT NF K NA LSYT+ DLIASL LN+KGD+L ASYYHIV + TAVGAELTHSFSSNEN+LT GTQH LDPLT VKAR+NN G+ASALIQHE+ PKSL TIS EVDT+AIEKS Sbjct: 136 GTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEK-SGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKS 264
BLAST of CF835474 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 178.333 bits (451), Expect = 3.750e-44 Identity = 85/130 (65.38%), Postives = 109/130 (83.85%), Query Frame = -3 Query: 352 GNNSVALGTDLSFDTATGNFTKCNAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQHEWRPKSLFTISGEVDTRAIEKS 741 G N ++LGTD++++T +GNF NAG ++T DL ASL LNDKG+ LNASYY IVSP +T VGAE++H+F++ EN +T+GTQHALDPLT+VKARVNN G A+ALIQHEWRPKS FT+SGEVD++AI+KS Sbjct: 136 GTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKS 263
BLAST of CF835474 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.431e-43 Identity = 86/130 (66.15%), Postives = 105/130 (80.77%), Query Frame = -3 Query: 352 GNNSVALGTDLSFDTATGNFTKCNAGLSYTHIDLIASLTLNDKGDTLNASYYHIVSPLTNTAVGAELTHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQHEWRPKSLFTISGEVDTRAIEKS 741 G+ ++++G D+SFDTAT +FTK NA LS T DLIASL LN+ GDTL ASYYH+V + TAVGAEL+HS S NE+TL G+QH+LDP T++K R NNYG ASAL+QHEWRPKS TISG+VDT+AIEKS Sbjct: 137 GSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKS 266 The following BLAST results are available for this feature:
BLAST of CF835474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835474 ID=CF835474; Name=CF835474; organism=Citrus sinensis; type=EST; length=743bpback to top |