CF835513

Overview
NameCF835513
Unique NameCF835513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1117 contig Csv1_Contig1117:186..915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 259.996 bits (663), Expect = 9.505e-69
Identity = 118/176 (67.05%), Postives = 151/176 (85.80%), Query Frame = -2
Query:  173 VDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 700
            VDL+KGEQR PEYL +QPFG++PV+ DGD+ ++ESRAIMRY AEKYRSQG +LLGKTIEERG VEQWL+VEA +Y+P +  LT+ ++F+   G P DEK++KES+EKL + LDVYE +LSK++YLAGDF SLADL+H+PFT YLVGP+G+ H+I+DRKHVSAWWD IS+R +WK+V
Sbjct:   32 VDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.975e-46
Identity = 87/179 (48.60%), Postives = 124/179 (69.27%), Query Frame = -2
Query:  164 VDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 700
            VDL K EQ+ P++L  QPFG++P I+DG   L+ESRAI RYYA KY  QGT+LLGKT+E R +V+QW+EVE + +      L + ++F  K G+P D  LV+E   K  K LDVYE RL+ ++YL GD F+LADLSH+P   Y++       ++  R++++ WW++IS RP+WKK++EL
Sbjct:   33 VDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.848e-39
Identity = 76/184 (41.30%), Postives = 113/184 (61.41%), Query Frame = -2
Query:  167 NLKLSPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 718
            + +L PV++  G+ +   ++ L PFG++P  +DGD  L+ESRAI +Y A  Y  +G +LL    ++  ++  W+EVE+  ++P   +LT +++     G   D+  V E++EKLGK LDVYE RL  SKYL GD F+LADL H P  +YL+G   +  +   R HVSAW  DI  RP+W K +E
Sbjct:   27 DFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADILARPAWSKAIE 209          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 3.895e-38
Identity = 83/188 (44.15%), Postives = 118/188 (62.77%), Query Frame = -2
Query:  152 KLSPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSK-FGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTP 712
            ++ P+D  KGE ++P++L   PFG++P +QDGD  L+ESRAI +Y   K + +   L    ++E  +V+ WLEVE++ Y PA+  +  Q L     FG P DEK+V+E+ EKL K L+VYE RL+K KYLAGD+ S+ADLSH+  T   +G      ++    HV AWW D+  RPS +KV  L K P
Sbjct:   30 EIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRKNKPE--LLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGT-VCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMKPP 214          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.480e-37
Identity = 81/178 (45.51%), Postives = 111/178 (62.36%), Query Frame = -2
Query:  173 VDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKF-GRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 700
            VD    E +SPE+LK  PFG++P  QDGD  L+ESRAI +Y   KY+++  +LL +  + E  +V+ W EVE H YN AI  +  + + +    G P ++K+V ES EKL K L+VYE RLS+S YLAGDF S ADL+H P+T Y +G      +     HV AWW+ +  RPS KK+
Sbjct:   34 VDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG-TPYASLFDSYPHVKAWWERLMARPSVKKL 210          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 3.297e-37
Identity = 80/185 (43.24%), Postives = 115/185 (62.16%), Query Frame = -2
Query:  158 PVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRY--YAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYL-AGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCK 703
            P+D+  G  + P YL L PFG++P ++DG+  L+ESRAI +Y  Y   ++++GT L+ K   E      W EVEAH ++P   +L  +L+F   FG   D  +V+E++ KL K LDVYE RL++S+YL A D F+L DL H+P   YL+G   ++ +  +R HVSAW   I  RPSW+K L L K
Sbjct:   32 PIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 154.836 bits (390), Expect = 4.306e-37
Identity = 80/189 (42.33%), Postives = 113/189 (59.79%), Query Frame = -2
Query:  152 NLKLSPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTP 718
            + ++ PVDL  G  + P++L L PFG++P + DGD +L+ESRAI RY A KY S+GT+LL  T     L E WLEVE+H+++P    L  QLL     G   D  +V++  E+L K LDVYE  L+++KYLAGD F+LAD +H            R   +  R HV AWW+ I+ RP+++K +     P
Sbjct:   28 DFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKL-EVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAIPLP 215          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 5.624e-37
Identity = 78/186 (41.94%), Postives = 115/186 (61.83%), Query Frame = -2
Query:  158 KLSPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEE-RGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCK 712
            +L PVD+  G  +   +L L PFG++P ++DGD  L+ESRAI +Y AE+Y  +G +L+ +  ++ +     WL+VE   ++P   +L  + +F   FG   D   V+E + KL K LDVYE RL+KS++LAGD F+LADL H+P  HYL+G   +  +   R  VS W   IS RP+W KV++L K
Sbjct:   78 ELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKV-LFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 152.14 bits (383), Expect = 2.791e-36
Identity = 83/189 (43.92%), Postives = 116/189 (61.38%), Query Frame = -2
Query:  158 SNLKLSPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCK 721
            S+ ++ P++    E +SPE+L   PFG++P +QDGD  L+ESRAI +Y A K +    ELL +  +EE  +V+ W+EVEA+ Y  A+  +  Q+L S   G   D+K+V E+ EKL K L+VYE RL+K KYLAGDF SLADL+H+  T  L        ++    HV AWW  +  RPS +KV  L K
Sbjct:   27 SDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARKNKP---ELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFA-TPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CF835513 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.646e-36
Identity = 77/184 (41.85%), Postives = 111/184 (60.33%), Query Frame = -2
Query:  167 NLKLSPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 718
            + +L PVD++ GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++  ++  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE RL++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+W K LE
Sbjct:   27 DFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
The following BLAST results are available for this feature:
BLAST of CF835513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
GSTF3_ARATH9.505e-6967.05Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH2.975e-4648.60Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF_HYOMU7.848e-3941.30Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF2_ORYSJ3.895e-3844.15Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF1_ORYSJ1.480e-3745.51Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF_SILCU3.297e-3743.24Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF3_MAIZE4.306e-3742.33Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF6_ARATH5.624e-3741.94Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_MAIZE2.791e-3643.92Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF2_TOBAC3.646e-3641.85Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01G04_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835513 ID=CF835513; Name=CF835513; organism=Citrus sinensis; type=EST; length=731bp
TTTTTTTTTTTTTTAAGCTCCAACTCCAAACATTTATTTACCTTAACACA
CATATGCAAGAAACATATCCCACAGACAGCCCCAAACCAAGTAGTAGAGA
AGTAAAACACAAGCCCGAAAATTGAAACACATACAATCAAGCTCAGCCGA
AAGGAGTCTTACAGAGCTCAAGGACTTTCTTCCAGGACGGCCTGTTGCTA
ATATCATCCCACCAGGCACTCACATGCTTCCTGTCTCTAATCATATGCTG
TCTCCCCATCGGCCCAACCAAGTAGTGGGTAAATGGAATGTGACTCAGAT
CAGCCAGGCTGAAGAAATCACCAGCCAAATACTTGCTCTTCGACAGCCTC
TCCTCGTAAACGTCGAGCGTTTTTCCAAGCTTTTCGTCACTCTCCTTCAC
CAATTTTTCATCAACGGGACGTCCAAACTTGGAGGAAAATAAAAGTTGGA
TGGTCAGCTCGTAAATTGCTGGGTTGTAGTTGTGTGCCTCTACTTCTAGC
CACTGTTCCACCAGGCCTCTTTCTTCAATTGTTTTACCCAGAAGTTCGGT
TCCTTGAGACCTGTACTTTTCAGCGTAGTACCTCATGATAGCTCGCGACT
CGTATAAAATAAAATCTCCATCTTGAATGACAGGAAGCTCTCCAAAAGGC
TGTAATTTGAGGTACTCAGGACTTCTCTGCTCTCCTTTGATGAGATCAAC
GGGGGACAGTTTCAAATTCGATTTCCTTCTC
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