CF835534
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_DICDI (Ubiquitin thioesterase OTU1 OS=Dictyostelium discoideum GN=yod1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 9.937e-32 Identity = 62/101 (61.39%), Postives = 80/101 (79.21%), Query Frame = -2 Query: 40 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDALAICPFEGAPEEFDQTIFPV 342 V SDP +Y+EA LGKSN+ YC+WIQ+P+ WGGAIELSIL+++Y EIAA+DI T YG+++KY+ERV LIYDG+HYDAL+IC + PE+FD T F V Sbjct: 162 VKSDPFEYNEAVLGKSNEGYCNWIQNPKNWGGAIELSILSNHYKVEIAAFDISTQLMYCYGEDRKYTERVYLIYDGIHYDALSICLTKNGPEDFDITRFSV 262
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_DROME (Ubiquitin thioesterase OTU1 OS=Drosophila melanogaster GN=CG4603 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.096e-25 Identity = 53/108 (49.07%), Postives = 76/108 (70.37%), Query Frame = -2 Query: 19 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDALAICPFEGAPEEFDQTIFPVQKVQVHR 342 VA+DP Y++A LGKSN EYC+WIQ + WGGAIE+SIL++YYG EI DIQ + +G++K + RV L++DG+HYD L + E +P TIFPV+++ V++ Sbjct: 190 VAADPQSYNDAVLGKSNAEYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFGEDKNFGLRVFLLFDGIHYDPLYM---ETSPSAAPATIFPVEELGVYQ 294
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_DANRE (Ubiquitin thioesterase OTU1 OS=Danio rerio GN=yod1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = -2 Query: 46 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDAL-AICPFEGAPEEFDQTIF 342 VASDP YSEA LGK+N+EYC+WI+ + WGGAIE+SIL+ +Y EI D QT R D +G++ Y++RV+LIYDG+HYD L + P P QT+F Sbjct: 143 VASDPTAYSEAVLGKTNEEYCTWIRRDDTWGGAIEVSILSKFYQCEICVVDTQTVRVDRFGEDAGYTKRVLLIYDGIHYDPLQKVLPGSDVPA---QTVF 239
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_MOUSE (Ubiquitin thioesterase OTU1 OS=Mus musculus GN=Yod1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.839e-24 Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = -2 Query: 97 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDAL 342 VASDPV YSEA LGK+N++YC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G++ Y++RV+LIYDG+HYD L Sbjct: 185 VASDPVLYSEAILGKTNEDYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDPL 266
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_HUMAN (Ubiquitin thioesterase OTU1 OS=Homo sapiens GN=YOD1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 9.960e-24 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = -2 Query: 97 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDAL 342 VASDP YSEA LGK+NQEYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G++ Y++RV+LIYDG+HYD L Sbjct: 190 VASDPDFYSEAILGKTNQEYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDPL 271
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_RAT (Ubiquitin thioesterase OTU1 OS=Rattus norvegicus GN=Yod1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.699e-23 Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = -2 Query: 97 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDAL 342 VASDP YSEA LGK+N+EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G++ Y++RV+LIYDG+HYD L Sbjct: 185 VASDPDLYSEAILGKTNEEYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDPL 266
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_BOVIN (Ubiquitin thioesterase OTU1 OS=Bos taurus GN=YOD1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.219e-23 Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = -2 Query: 97 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDAL 342 VASDP YSEA LGK+N+EYC WI+ + WGGAIE+SIL+ +Y EI D QT R D +G++ Y++RV+LIYDG+HYD L Sbjct: 190 VASDPDFYSEAILGKTNEEYCDWIKRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDPL 271
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_CHICK (Ubiquitin thioesterase OTU1 OS=Gallus gallus GN=YOD1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.785e-23 Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = -2 Query: 97 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDAL 342 VASDP Y EA LGK+N+EYC WI+ E WGGAIE+SIL+ +Y EI D QT R D +G++ Y++RV+LIYDG+HYD L Sbjct: 144 VASDPEAYCEAVLGKTNREYCEWIRREETWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDPL 225
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_DROPS (Ubiquitin thioesterase OTU1 OS=Drosophila pseudoobscura pseudoobscura GN=GA18292 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.456e-23 Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = -2 Query: 19 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDALAICPFEGAPEEFDQTIFPVQKVQVHR 342 V++D +Y++A LGKSN +YC+WIQ + WGGAIE+SIL++YYG EI DIQ + +G++K + RV L++DG+HYD L + E TIFPV+++ V++ Sbjct: 201 VSADTQQYNDAVLGKSNSDYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFGEDKNFGLRVFLLFDGIHYDPLYM---ETQQNSVPATIFPVEEMGVYQ 305
BLAST of CF835534 vs. ExPASy Swiss-Prot
Match: OTU1_XENLA (Ubiquitin thioesterase OTU1 OS=Xenopus laevis GN=yod1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = -2 Query: 97 VASDPVKYSEAFLGKSNQEYCSWIQDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKKYSERVMLIYDGLHYDAL 342 VASD Y +A LGKSN+EYCSWI+ + WGGAIE+SIL+ +Y EI D QT R D +G++ Y++RV+LIYDG+HYD L Sbjct: 146 VASDQSAYCDAVLGKSNEEYCSWIRREDTWGGAIEVSILSKFYQCEICVVDTQTVRIDRFGEDSGYTKRVLLIYDGIHYDPL 227 The following BLAST results are available for this feature:
BLAST of CF835534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835534 ID=CF835534; Name=CF835534; organism=Citrus sinensis; type=EST; length=343bpback to top |