CF835555

Overview
NameCF835555
Unique NameCF835555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11350 contig Csv1_Contig11350:526..1262. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACLY_DICDI (Probable ATP-citrate synthase OS=Dictyostelium discoideum GN=acly PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = -2
Query:  250 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 735
            GPRFGGAIDD+AR F+DA D  L   +FVE MK KG R+PGIGH IK  D  DKRV LL+ +A THF S KY+EYA++VE YTL KANNL+LNVDG IG LFLDLL  SG+F++ EI EI+++GYLNG F++ RS+GLIGH  DQ+R KQ LYRH  +DV Y
Sbjct:  459 GPRFGGAIDDSARVFQDAVDNNLQPSQFVEGMKSKGKRIPGIGHLIKSADEIDKRVVLLKDYAFTHFSSTKYLEYALEVEKYTLQKANNLILNVDGCIGVLFLDLLHSSGLFTQHEIKEIIDVGYLNGFFIVGRSVGLIGHALDQRRNKQGLYRHQADDVHY 620          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACLY_CAEEL (Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.449e-48
Identity = 96/165 (58.18%), Postives = 120/165 (72.73%), Query Frame = -2
Query:  250 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFA---RTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 735
            G RFGGA+D AAR F +A+D+G SA +FV  M+KKG  + GIGHR+K  +N DKRVE+L++FA   +         EYA++VE  T +K  NL+LNVDGAI  LF+D+L  SGMF+KQE +E +EIG LNGLFVL RSIG IGH  DQ RLKQ LYRHPW+D+ Y
Sbjct:  932 GDRFGGALDGAARQFSEAFDQGWSANQFVSEMRKKGKHIMGIGHRVKSINNPDKRVEILKRFAMDKKEFAQETPLFEYALEVEKITTAKKPNLILNVDGAIAILFVDILRHSGMFTKQEAEETIEIGSLNGLFVLGRSIGFIGHYLDQSRLKQGLYRHPWDDISY 1096          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACLY_MOUSE (ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.392e-48
Identity = 89/162 (54.94%), Postives = 117/162 (72.22%), Query Frame = -2
Query:  250 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 735
            G RFGGA+D AA+ F  A+D G+   EFV  MKK+G  + GIGHR+K  +N D RV++L+ F + HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE V+IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  922 GDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNVDGFIGVAFVDMLRNCGSFTREEADEYVDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1083          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACLY_HUMAN (ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 9.392e-48
Identity = 88/162 (54.32%), Postives = 117/162 (72.22%), Query Frame = -2
Query:  250 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 735
            G RFGGA+D AA+ F  A+D G+   EFV  MKK+G  + GIGHR+K  +N D RV++L+ + R HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE ++IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  932 GDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1093          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACLY_RAT (ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.227e-47
Identity = 89/162 (54.94%), Postives = 117/162 (72.22%), Query Frame = -2
Query:  250 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 735
            G RFGGA+D AA+ F  A+D G+   EFV  MKK+G  + GIGHR+K  +N D RV++L+ F + HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE V+IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  931 GDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNVDGFIGVAFVDMLRNCGSFTREEADEYVDIGALNGVFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1092          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACL1_SCHPO (Probable ATP-citrate synthase subunit 1 OS=Schizosaccharomyces pombe GN=SPBC1703.07 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.227e-47
Identity = 91/162 (56.17%), Postives = 116/162 (71.60%), Query Frame = -2
Query:  250 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 735
            G RFGGA+D AA+ F  AYD GLS   FV+S +K    +PGIGHRIK  +N D RVEL++ + + +FPS K ++YA+ VE  T SK +NL+LNVDG I   F+DLL   G F+ +E +E + +G LNG+FVL RSIGLIGH  DQKRL+ PLYRHPW+D LY
Sbjct:  452 GTRFGGALDGAAQEFSKAYDAGLSPRAFVDSCRKANKLIPGIGHRIKSRNNPDLRVELVKGYVKKNFPSTKLLDYALAVENVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFTLEEANEYINLGILNGMFVLGRSIGLIGHHLDQKRLRAPLYRHPWDDFLY 613          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACLY_SHEEP (ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.602e-47
Identity = 88/162 (54.32%), Postives = 117/162 (72.22%), Query Frame = -2
Query:  250 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 735
            G RFGGA+D AA+ F  A+D G+   EFV  MKK+G  + GIGHR+K  +N D RV++L+ + R HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE ++IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  932 GDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRHCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1093          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACLY_BOVIN (ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.602e-47
Identity = 88/162 (54.32%), Postives = 117/162 (72.22%), Query Frame = -2
Query:  250 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 735
            G RFGGA+D AA+ F  A+D G+   EFV  MKK+G  + GIGHR+K  +N D RV++L+ + R HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE ++IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  922 GDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRHCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1083          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACL1_SORMA (ATP-citrate synthase subunit 1 OS=Sordaria macrospora GN=ACL1 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.092e-47
Identity = 93/173 (53.76%), Postives = 122/173 (70.52%), Query Frame = -2
Query:  217 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK*FTSRQQVG 735
            G RFGGA+D AA  F  A+D+GLS  EFV++M+K+   +PGIGHR+K  +N D RVEL++++ +  FPS K ++YA+ VET T SK +NL+LNVDG I   F+DLL   G FS +E ++ + +G LNGLFVL RSIGLI H  DQKRL+  LYRHPW+D+ Y     S QQ G
Sbjct:  492 GSRFGGALDGAAEEFTKAFDKGLSPREFVDTMRKQNKLIPGIGHRVKSRNNPDLRVELVKEYVKAKFPSSKLLDYALAVETVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFSTEEAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDITYL--LPSLQQPG 662          
BLAST of CF835555 vs. ExPASy Swiss-Prot
Match: ACL1_NEUCR (Probable ATP-citrate synthase subunit 1 OS=Neurospora crassa GN=B14D6.310 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.569e-47
Identity = 92/173 (53.18%), Postives = 122/173 (70.52%), Query Frame = -2
Query:  217 GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK*FTSRQQVG 735
            G RFGGA+D AA  F  A+D+GLS  EFV++M+K+   +PGIGHR+K  +N D RVEL++++ +  FPS K ++YA+ VE+ T SK +NL+LNVDG I   F+DLL   G FS +E ++ + +G LNGLFVL RSIGLI H  DQKRL+  LYRHPW+D+ Y     S QQ G
Sbjct:  488 GSRFGGALDGAAEEFTKAFDKGLSPREFVDTMRKQNKLIPGIGHRVKSRNNPDLRVELVKEYVKAKFPSTKLLDYALAVESVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFSTEEAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDITYL--LPSLQQPG 658          
The following BLAST results are available for this feature:
BLAST of CF835555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ACLY_DICDI9.371e-5664.20Probable ATP-citrate synthase OS=Dictyostelium dis... [more]
ACLY_CAEEL1.449e-4858.18Probable ATP-citrate synthase OS=Caenorhabditis el... [more]
ACLY_MOUSE9.392e-4854.94ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 ... [more]
ACLY_HUMAN9.392e-4854.32ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 ... [more]
ACLY_RAT1.227e-4754.94ATP-citrate synthase OS=Rattus norvegicus GN=Acly ... [more]
ACL1_SCHPO1.227e-4756.17Probable ATP-citrate synthase subunit 1 OS=Schizos... [more]
ACLY_SHEEP1.602e-4754.32ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV... [more]
ACLY_BOVIN1.602e-4754.32ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV... [more]
ACL1_SORMA2.092e-4753.76ATP-citrate synthase subunit 1 OS=Sordaria macrosp... [more]
ACL1_NEUCR3.569e-4753.18Probable ATP-citrate synthase subunit 1 OS=Neurosp... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_01H13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835555 ID=CF835555; Name=CF835555; organism=Citrus sinensis; type=EST; length=736bp
TTTTTTTTTTTTTTTTTCAGATTTTGAAACATCACTTCGTTCCTTAAAGA
TCTGAGAGTCGTATCTTGATGAACTTTCAACCTTTAGACCAAAGTTTTCG
GCTGGTACTTCAAATTACAAAAACAGTAATCTAAAAACCCAACAACAATT
CCAGCAAAATACAGATTTAAAGACTTCAAAAGGGAAAATGTTTTGGAAAG
CATGTTGATTATGATTTCCCACCTGTTGCCGGGAAGTGAATTACTTGGTG
TAGAGAACATCTTCCCATGGGTGACGGTATAGAGGTTGTTTCAATCTCTT
CTGGTCAAAGGTATGCCCAATCAAACCGATGGAGCGTGCCAGAACAAAGA
GCCCATTCAGATATCCAATTTCCACTATCTCATCGATTTCTTGCTTGCTG
AACATTCCACTGCCAGCAAGAAGATCCAAGAAAAGGGACCCAATTGCACC
ATCTACATTAAGAACCAGGTTGTTTGCTTTTGATAGAGTGTAGGTTTCAA
CTTGAACAGCATATTCCATATACTTCACAGAAGGGAAATGAGTGCGTGCA
AATTTTTGTAGCAGCTCCACTCTTTTGTCTCTGTTATCTCCTCTCTTGAT
CCTGTGCCCAATTCCTGGCACACGTATGCCCTTCTTTTTCATTGATTCAA
CAAATTCATAGGCTGAAAGACCCCGGTCATAAGCATCCTTGAAATATCGG
GCAGCATCATCAATGGCGCCACCAAATCGGGGACCA
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