CF835562

Overview
NameCF835562
Unique NameCF835562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7523 contig Csv1_Contig7523:39..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: ACS2_RUTGR (Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=1 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 4.721e-92
Identity = 166/222 (74.77%), Postives = 185/222 (83.33%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            M +++E+R AQ++EG A ILAI TATP N  IQADYPDYYF IT SEHMT            SMIRKRHMC ++E LKANP +C HMG SL+ARQDI++VE P++GKEAA KAIKEWG PKS+ITHLIFCTSAGVDMPGADYQLTR++GLNP VKRMMIYQQGCYAG T+LRLAKDLAENNKGSRVLVVCSE T PTFRGPS   +DSLVGQALFADGAAAL
Sbjct:    1 MESLKEMRKAQKSEGPAAILAIGTATPDNVYIQADYPDYYFKITKSEHMTELKDKFKTLCEKSMIRKRHMCFSQEFLKANPEVCKHMGKSLNARQDIAVVETPRIGKEAAVKAIKEWGHPKSSITHLIFCTSAGVDMPGADYQLTRMLGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAENNKGSRVLVVCSELTAPTFRGPSPDAVDSLVGQALFADGAAAL 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.166e-92
Identity = 164/222 (73.87%), Postives = 187/222 (84.23%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            MVT+EE+R AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPN+C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENNKG+RVLVVCSE T  TFRGPS  H+DSLVGQALF DGAAA+
Sbjct:    1 MVTVEEVRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMYLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFGDGAAAI 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.052e-91
Identity = 165/222 (74.32%), Postives = 188/222 (84.68%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            MV++EEIRNAQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENNKG+RVLVVCSE T  TFRGP+ TH+DSLVGQALF DGAAA+
Sbjct:    1 MVSVEEIRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAV 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.794e-91
Identity = 166/222 (74.77%), Postives = 185/222 (83.33%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            MV++ EIR AQRAEG AT+LAI TATP NCV QADYPDYYF ITNSEHMT            SMI KR+M LTEEILK NPN+C +M  SLDARQD+ +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN GSRVLVVCSE T  TFRGPS TH+DSLVGQALF DGAAA+
Sbjct:    1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAV 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.343e-91
Identity = 167/222 (75.23%), Postives = 186/222 (83.78%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            M T++EIRNAQRA+G AT+LAI TATP + V QADYPDYYF IT SEHMT            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+LIGL P VKR M+YQQGC+AG T+LRLAKDLAENNKG+RVLVVCSE T  TFRGP+ TH+DSLVGQALF DGAAA+
Sbjct:    1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 3.060e-91
Identity = 162/222 (72.97%), Postives = 187/222 (84.23%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            MVT+EE+R AQRAEG AT+LAI TATPPNC+ Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK +PNMC +M  SLDARQD+ +VE+PKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+G+RVLVVCSE T  TFRGPS TH+DSLVGQALF DGAAA+
Sbjct:    1 MVTVEEVRKAQRAEGPATVLAIGTATPPNCLDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMYLTEEILKEHPNMCAYMAPSLDARQDMVVVEIPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAI 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 5.219e-91
Identity = 167/222 (75.23%), Postives = 185/222 (83.33%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            MV++ EIR AQRAEG ATILAI TA PPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M LTEEILK NPNMC +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+ +GL P VKR M+YQQGC+AG T+LRLAKDLAENNKG+RVLVVCSE T  TFRGPS TH+DSLVGQALF DGAAA+
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKEKFQRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAV 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 5.219e-91
Identity = 164/222 (73.87%), Postives = 187/222 (84.23%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            MV++EEIR AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENNKG+RVLVVCSE T  TFRGP+ TH+DSLVGQALF DGAAA+
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAV 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.903e-91
Identity = 166/222 (74.77%), Postives = 186/222 (83.78%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            MV++ EIR AQRAEG ATILAI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M +TEEILK NP+MC +M  SLDARQDI +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENNKG+RVLVVCSE T  TFRGPS TH+DSLVGQALF DGAAA+
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHVTEEILKENPSMCAYMAPSLDARQDIVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAV 222
[Close]
BLAST of CF835562 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.903e-91
Identity = 165/222 (74.32%), Postives = 187/222 (84.23%), Query Frame = 3 
Query:   69 MVTMEEIRNAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNKGSRVLVVCSENTIPTFRGPSYTHIDSLVGQALFADGAAAL 734
            MVT++EIR AQ+AEG AT+LAI TATPPNCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENNKG+RVLVVCSE T  TFRGPS TH+DSLVGQALF DGAAA+
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPHVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAV 222
The following BLAST results are available for this feature:
BLAST of CF835562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
ACS2_RUTGR4.721e-9274.77Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=... [more]
CHS2_CAMSI6.166e-9273.87Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHS3_SOYBN1.052e-9174.32Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHSY_VITVI1.794e-9174.77Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHS2_CITSI2.343e-9175.23Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS1_CASGL3.060e-9172.97Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]
CHSY_PUELO5.219e-9175.23Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHS1_SOYBN5.219e-9173.87Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHSY_VIGUN8.903e-9174.77Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHSB_PEA8.903e-9174.32Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01H19_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835562 ID=CF835562; Name=CF835562; organism=Citrus sinensis; type=EST; length=736bp
CGCGAAAGCGCACACTTATTAATTAACTAAGTTTAAGTACTGTTTTGGAA
GCAATCTGACGATCAGAGATGGTAACCATGGAGGAGATTAGAAACGCTCA
GCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAACGCCGC
CCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGATCACC
AACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTGTGTGA
GAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGATTTTAA
AAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTCGATGCGCGC
CAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCGGCAAC
CAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCATCTCA
TTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATCAGCTC
ACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATATATCA
ACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGATTTGG
CTGAAAACAACAAGGGCTCTCGTGTTCTTGTTGTTTGTTCTGAGAACACA
ATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTCTTTAGTGGG
TCAGGCTCTTTTCGCTGATGGGGCTGCTGCACTGAT
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