CF835576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.006e-31 Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 3 Query: 12 VAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIG 239 VAV HTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF GET P+PVY+SLLPIIGGCALAA+TELNFN+ G Sbjct: 165 VAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITG 240 HSP 2 Score: 120.939 bits (302), Expect = 5.710e-27 Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 2 Query: 386 SGFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPHMWTAGWQKAIAQIGPNFVWYIL*PRILYELF 649 +GFMGAMISNLAFVFRNIF NYYACLSMMSL+ILTPF+IAVE P MW AGWQ A++Q+GPNFVW+++ + Y L+ Sbjct: 239 TGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLY 326
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.518e-31 Identity = 66/76 (86.84%), Postives = 71/76 (93.42%), Query Frame = 3 Query: 12 VAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIG 239 VAV HTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF+ GET P VY+SL+PIIGGCAL+A+TELNFNMIG Sbjct: 165 VAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIG 240 HSP 2 Score: 118.627 bits (296), Expect = 2.834e-26 Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 2 Query: 389 GFMGAMISNLAFVFRNIFXXXXXXXXXXXXXNYYACLSMMSLLILTPFAIAVEGPHMWTAGWQKAIAQIGPNFVWYIL*PRILYELF 649 GFMGAMISNLAFVFRNIF NYYACLSM+SLLILTPFAIAVEGP MW GWQ A+A +GP FVW+++ + Y L+ Sbjct: 240 GFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVGPQFVWWVVAQSVFYHLY 326
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.559e-16 Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 3 Query: 6 VQVAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGEIN 248 + VAV H IGHV + VS + VAVSFTH IK+ EP F+ S+FL G+ +P+ +++SL P++ G A+A++TEL+FN +G I+ Sbjct: 171 IPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVVLGVAMASLTELSFNWLGFIS 251
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.472e-16 Identity = 38/81 (46.91%), Postives = 61/81 (75.31%), Query Frame = 3 Query: 6 VQVAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGEIN 248 + VAV H IGHV + VS + VAVSFTH IK+ EP F+ S+F+ G+++P+ +++SL P++ G ++A++TEL+FN +G I+ Sbjct: 168 IPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFIS 248
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.923e-16 Identity = 36/81 (44.44%), Postives = 61/81 (75.31%), Query Frame = 3 Query: 6 VQVAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGEIN 248 + VAV H +GHV + VS + VAVSFTH +K+ EP F+ S+F+ G+++P+ +++SL P++ G ++A++TEL+FN +G I+ Sbjct: 166 IPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFIS 246
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.735e-16 Identity = 37/81 (45.68%), Postives = 60/81 (74.07%), Query Frame = 3 Query: 6 VQVAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGEIN 248 + VA H +GHV + VS + VAVSFTH IKS EP F+ S+F+ G+++P+ +++SL P++ G ++A++TEL+FN +G I+ Sbjct: 172 IPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFIS 252
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 35/81 (43.21%), Postives = 59/81 (72.84%), Query Frame = 3 Query: 6 VQVAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGEIN 248 + V H +GHV + VS + VAVSFTH IK+ EP F+ S+F+ G+++P+ +++SL P++ G ++A++TEL+FN +G I+ Sbjct: 171 IPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTELSFNWLGFIS 251
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14 Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 3 Query: 12 VAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGEINCSKCG-*NDSDYILKKK 296 +AVVHT+G++ +S+ KV+VSFTH IK+ EP FSV++S GE V S++PI+GG ALA+VTE++FN G ++ N S +L KK Sbjct: 170 LAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEVPTPWVIGSIIPIVGGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKK 265
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 36/79 (45.57%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 12 VAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGEIN 248 VA+ H IGH+ + VS + VAVSF H IK+ EP FS ++F+ G+ +P +++SL P++ G ++A++TEL+FN G IN Sbjct: 176 VALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTELSFNWTGFIN 254
BLAST of CF835576 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.250e-14 Identity = 33/76 (43.42%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 12 VAVVHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIG 239 VA H +GHV + VS + V VSFTH +K+ EP F+ S+F+ G+ +P+ +++SL P++ G ++A++TEL+FN +G Sbjct: 180 VAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVVLGVSMASLTELSFNWLG 255 The following BLAST results are available for this feature:
BLAST of CF835576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835576 ID=CF835576; Name=CF835576; organism=Citrus sinensis; type=EST; length=656bpback to top |