CF835668

Overview
NameCF835668
Unique NameCF835668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11999 contig Csv1_Contig11999:44..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.767e-96
Identity = 170/175 (97.14%), Postives = 174/175 (99.43%), Query Frame = 3
Query:  192 GIESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 716
            GI++IPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHEN+VAIRDIIPPPQRE+FNDVYIAYELMDTDLHQIIRSNQ LSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC
Sbjct:   29 GIDNIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 203          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 8.768e-96
Identity = 176/206 (85.44%), Postives = 179/206 (86.89%), Query Frame = 3
Query:   99 GGPPAADTEMXXXXXXXXXXXXXXXXXXXXGGIESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 716
            GG P ADT M                     GIE+IPA LSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSA NSETNEHVA+KKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDI+PPPQRE FNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC
Sbjct:    4 GGAPPADTVMSDAAPAPPQM-----------GIENIPAVLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 198          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.145e-95
Identity = 176/205 (85.85%), Postives = 180/205 (87.80%), Query Frame = 3
Query:  102 GPPAADTEMXXXXXXXXXXXXXXXXXXXXGGIESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 716
            G PAADTEM                     GIE+IPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSA+NSETNE VAIKKIANAFDNKIDAKRTLREIKLLRHMDHEN+VAIRDIIPPP R +FNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC
Sbjct:    6 GQPAADTEMTEAPGGFPAAAPSPQMP----GIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAMNSETNESVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 206          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.145e-95
Identity = 175/206 (84.95%), Postives = 180/206 (87.38%), Query Frame = 3
Query:   99 GGPPAADTEMXXXXXXXXXXXXXXXXXXXXGGIESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 716
            GG PAAD  M                     GIE+IPATLSHGGRFIQYNIFGNIFEVTAKY+PPIMPIGKGAYGIVCSA NSETNEHVA+KKIANAFDNKIDAKRTLREIKL+RHMDHENVVAIRDI+PPPQRE FNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC
Sbjct:    5 GGAPAADAVMEDAAPQQQEPQQQAAM-----GIENIPATLSHGGRFIQYNIFGNIFEVTAKYRPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLVRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 205          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.388e-93
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 3
Query:  189 GGIESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 716
            G +E+I ATLSHGGRFIQYNIFGN+FEVTAKYKPPI+PIGKGAYGIVCSALNSET E VAIKKIANAFDNKIDAKRTLREIKLLRHMDHEN+VAIRDIIPPPQR SFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC
Sbjct:   35 GMMENIQATLSHGGRFIQYNIFGNVFEVTAKYKPPILPIGKGAYGIVCSALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 210          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 3.027e-80
Identity = 136/176 (77.27%), Postives = 161/176 (91.48%), Query Frame = 3
Query:  189 GGIESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 716
            G     PA  +HGG+FI Y+IFG++FE+T+KY+PPI+PIG+GAYGIVCS L++ETNE VA+KKIANAFDN +DAKRTLREIKLLRH+DHEN++AIRD++PPP R  F+DVYI+ ELMDTDLHQIIRSNQ+LSEEHCQYFLYQ+LRGLKYIHSAN++HRDLKPSNLLLNANCDLKIC
Sbjct:    6 GQYTDFPAVETHGGQFISYDIFGSLFEITSKYRPPIIPIGRGAYGIVCSVLDTETNELVAMKKIANAFDNHMDAKRTLREIKLLRHLDHENIIAIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANIIHRDLKPSNLLLNANCDLKIC 181          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.170e-78
Identity = 137/168 (81.55%), Postives = 154/168 (91.67%), Query Frame = 3
Query:  213 TLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 716
            T++HGGR++ Y+IFGN FEVT KY+PPIMPIG+GAYGIVCS +N ET E VAIKKIANAF+N +DAKRTLREIKLLRH+DHEN++ IRD+IPPP  ++FNDVYIA ELMDTDLH IIRSNQ LSEEHCQYFLYQILRGLKYIHSANV+HRDLKPSNLLLNANCDLKIC
Sbjct:   12 TMTHGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKIC 179          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.170e-78
Identity = 137/168 (81.55%), Postives = 154/168 (91.67%), Query Frame = 3
Query:  213 TLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC 716
            T++HGGR++ Y+IFGN FEVT KY+PPIMPIG+GAYGIVCS +N ET E VAIKKIANAF+N +DAKRTLREIKLLRH+DHEN++ IRD+IPPP  ++FNDVYIA ELMDTDLH IIRSNQ LSEEHCQYFLYQILRGLKYIHSANV+HRDLKPSNLLLNANCDLKIC
Sbjct:   12 TMTHGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIVCSVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKIC 179          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.133e-77
Identity = 132/175 (75.43%), Postives = 155/175 (88.57%), Query Frame = 3
Query:  189 GGIESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            G   S     +HGG ++QYN++GN+FEV+ KY PP+ PIG+GAYGIVC+A NSET E VAIKKI NAFDN IDAKRTLREIKLL+HMDHENV+A++DII PPQRE+FNDVYI YELMDTDLHQIIRSNQ L+++HC++FLYQ+LRGLKY+HSANVLHRDLKPSNLLLNANCDLK+
Sbjct:   11 GDQSSSKGVATHGGSYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSETGEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYELMDTDLHQIIRSNQPLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKL 185          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 9.115e-77
Identity = 133/175 (76.00%), Postives = 154/175 (88.00%), Query Frame = 3
Query:  189 GGIESIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            GG   I    +HGGR++ YN++GN FEV++KY PPI PIG+GAYGIVC+A+NSE  E VAIKKI NAFDN IDAKRTLREIKLLRHMDHEN++AI+DII PP+R++FNDVYI  ELMDTDLHQIIRSNQ L+++HCQYFLYQ+LRGLKY+HSANVLHRDLKPSNL LNANCDLKI
Sbjct:   11 GGGAQIKGMGTHGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIVCAAVNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKI 185          
The following BLAST results are available for this feature:
BLAST of CF835668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NTF4_TOBAC1.767e-9697.14Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MMK1_MEDSA8.768e-9685.44Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MPK6_ARATH1.145e-9585.85Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MAPK_PEA1.145e-9584.95Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
MPK1_ORYSJ2.388e-9394.32Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
MPK3_ARATH3.027e-8077.27Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MPK5_ORYSJ2.170e-7881.55Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI2.170e-7881.55Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK4_ARATH3.133e-7775.43Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MPK6_ORYSJ9.115e-7776.00Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01K19_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835668 ID=CF835668; Name=CF835668; organism=Citrus sinensis; type=EST; length=716bp
TTCAATCCTTAACACTAGCACGTAGCATATCACTGAGCATGATCCCAGCA
CTCAAGTAACAAGAAGCCCCGATAAAGAAAGCGAGCGATAAAATGGAAGG
TGGGCCCCCGGCGGCGGACACGGAGATGGCGGAGGCGCAGCCCGACCCAC
AGCAGACGGCGGCTCCAGCAGCTGCAGCTCCAGCGGCAGGGGGGATCGAG
AGCATCCCGGCGACTTTGAGCCACGGAGGGAGGTTTATACAATATAACAT
TTTTGGTAACATTTTTGAGGTTACTGCTAAGTATAAGCCACCGATTATGC
CCATCGGGAAAGGTGCATACGGCATCGTTTGTTCGGCACTAAACTCGGAG
ACGAATGAGCACGTGGCGATAAAAAAGATAGCTAATGCATTCGATAACAA
AATTGATGCAAAGAGGACGCTTCGTGAGATCAAGTTGCTTCGACACATGG
ATCATGAAAACGTTGTTGCAATCAGGGATATAATACCGCCACCACAAAGG
GAATCATTTAATGATGTTTATATTGCATATGAGCTCATGGATACTGACCT
GCATCAGATAATTCGTTCCAATCAAGCATTATCAGAGGAGCACTGTCAGT
ATTTCCTGTATCAGATCCTCCGTGGACTTAAATACATACATTCTGCAAAT
GTTCTTCACAGGGATTTGAAACCTAGCAATCTCCTCCTGAATGCCAACTG
TGACTTAAAAATATGT
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