CF835670

Overview
NameCF835670
Unique NameCF835670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length550
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1119 contig Csv1_Contig1119:1..551. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE_YEAST (Glutamine-dependent NAD(+) synthetase OS=Saccharomyces cerevisiae GN=QNS1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.438e-45
Identity = 82/154 (53.25%), Postives = 111/154 (72.08%), Query Frame = 3
Query:   87 LLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            L+ +ATCNLNQWA+DF+ N   I +SI  AKE GA +R+GPELEITGYGC DHFLE D   H+WE    ++    T G++   GMPV++ + RYNC++L L+ +I+ IRPK+WLANDGNYRE+R+FT W +   +EDF+LP EI +   Q+ +P
Sbjct:    4 LITLATCNLNQWALDFEGNRDRILQSIKIAKERGARLRVGPELEITGYGCLDHFLENDVCLHSWEMYAQIIKNKETHGLILDIGMPVLHKNVRYNCRLLSLDGEILFIRPKIWLANDGNYREMRFFTPWMKPGVVEDFILPPEIQKVTGQRLVP 157          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE1_BOVIN (Glutamine-dependent NAD(+) synthetase OS=Bos taurus GN=NADSYN1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.338e-43
Identity = 82/155 (52.90%), Postives = 110/155 (70.97%), Query Frame = 3
Query:   84 RLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            R + VATC LNQWA+DF+ N++ I +SI  AK  GA  RLGPELEI GYGC DH+ E DT+ H+ + L  LL    T  I+C  GMPV++ + RYNC+V+ LNRKI++IRPK+ LAN+GNYRELRWFT W +  Q E++ LP  + +   Q+++P
Sbjct:    3 RKVTVATCALNQWALDFEGNLQRILKSIEIAKHRGARYRLGPELEICGYGCWDHYYESDTLLHSLQVLAALLESPVTQDIICDVGMPVMHRNVRYNCRVIFLNRKILLIRPKMALANEGNYRELRWFTPWSRSRQTEEYFLPRMLQDLTKQETVP 157          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE1_HUMAN (Glutamine-dependent NAD(+) synthetase OS=Homo sapiens GN=NADSYN1 PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 2.981e-43
Identity = 81/155 (52.26%), Postives = 110/155 (70.97%), Query Frame = 3
Query:   84 RLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            R + VATC LNQWA+DF+ N++ I +SI  AK  GA  RLGPELEI GYGC DH+ E DT+ H+++ L  L+    T  I+C  GMPV++ + RYNC+V+ LNRKI++IRPK+ LAN+GNYRELRWFT W +    E++ LP  I +   Q+++P
Sbjct:    3 RKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYESDTLLHSFQVLAALVESPVTQDIICDVGMPVMHRNVRYNCRVIFLNRKILLIRPKMALANEGNYRELRWFTPWSRSRHTEEYFLPRMIQDLTKQETVP 157          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE1_MOUSE (Glutamine-dependent NAD(+) synthetase OS=Mus musculus GN=Nadsyn1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.893e-43
Identity = 82/155 (52.90%), Postives = 110/155 (70.97%), Query Frame = 3
Query:   84 RLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            R + VATC LNQWA+DF+ N + I +SI  AK  GA  RLGPELEI GYGC DH+ E DT+ H+ + L  LL    T  I+C  GMP+++ + RYNC+V+ LNRKI++IRPK+ LAN+GNYRELRWFT W +  Q E+++LP  + +   QK++P
Sbjct:    3 RKVTVATCALNQWALDFEGNFQRILKSIQIAKGKGARYRLGPELEICGYGCWDHYHESDTLLHSLQVLAALLDSPVTQDIICDVGMPIMHRNVRYNCRVIFLNRKILLIRPKMALANEGNYRELRWFTPWTRSRQTEEYVLPRMLQDLTKQKTVP 157          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE1_MACFA (Glutamine-dependent NAD(+) synthetase OS=Macaca fascicularis GN=NADSYN1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.084e-43
Identity = 82/155 (52.90%), Postives = 110/155 (70.97%), Query Frame = 3
Query:   84 RLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            R + VATC LNQWA+DF+ N++ I +SI  AK  GA  RLGPELEI GYGC DH+ E DT+ H+++ L  LL    T  I+C  GMPV++ + RYNC+V+ L+RKI++IRPK+ LAN+GNYRELRWFT W +    E++LLP  I +   Q++ P
Sbjct:    3 RKVTVATCALNQWALDFEGNLQRILKSIEIAKNRGARYRLGPELEICGYGCWDHYYESDTLLHSFQVLAALLESPVTQDIICDVGMPVMHRNVRYNCRVIFLSRKILLIRPKMALANEGNYRELRWFTPWSRSRHTEEYLLPRMIQDLTKQETAP 157          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE1_CHICK (Glutamine-dependent NAD(+) synthetase OS=Gallus gallus GN=NADSYN1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.640e-43
Identity = 81/155 (52.26%), Postives = 108/155 (69.68%), Query Frame = 3
Query:   84 RLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            R + VA C LNQWA+DF+ N + I  SI+ AK  GA  RLGPELEI GYGC DH+ E DT+ H+++ L  LL    T  I+C  GMP+++ + RYNC+V+ LN+KI++IRPK+ LAN GNYRELRWFT W +   +E++LLP  I E   Q ++P
Sbjct:    3 RAVSVAACALNQWALDFEGNAERILRSISIAKSKGARYRLGPELEICGYGCADHYYESDTLLHSFQVLAKLLESPATQDIICDVGMPLMHRNVRYNCRVIFLNKKILLIRPKISLANAGNYRELRWFTPWNKARHVEEYLLPRIIQEVTGQDTVP 157          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE1_RAT (Glutamine-dependent NAD(+) synthetase OS=Rattus norvegicus GN=Nadsyn1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.523e-42
Identity = 81/155 (52.26%), Postives = 109/155 (70.32%), Query Frame = 3
Query:   84 RLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            R + VATC LNQWA+DF+ N + I +SI  AK  GA  RLGPELEI GYGC DH+ E DT+ H+ + L  LL    T  I+C  GMP+++ + RYNC V+ LNRKI++IRPK+ LAN+GNYRELRWFT W +  Q E+++LP  + +   Q+++P
Sbjct:    3 RKVTVATCALNQWALDFEGNFQRILKSIQIAKGKGARYRLGPELEICGYGCWDHYHESDTLLHSLQVLAALLDAPATQDIICDVGMPIMHRNVRYNCLVIFLNRKILLIRPKMALANEGNYRELRWFTPWARSRQTEEYVLPRMLQDLTKQETVP 157          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE_SCHPO (Putative glutamine-dependent NAD(+) synthetase OS=Schizosaccharomyces pombe GN=SPCC553.02 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.588e-42
Identity = 77/155 (49.68%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   84 RLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            R + +A+C LNQWAMDF+ N   I +SI  AK   A +R+GPELE+TGYGCEDHFLE DT  H+WE L  ++       IL   GMPV++ + R+NC++L LN KI++IRPK+WL +DGN+RE RWFT W +   +E   LP  ++++L Q ++P
Sbjct:    3 RYVTIASCQLNQWAMDFEGNRLRIIDSIKEAKRQNASLRVGPELEVTGYGCEDHFLESDTYYHSWEMLCSIIHDPDCQDILLDIGMPVMHKAMRHNCRILALNGKILLIRPKIWLCDDGNFRESRWFTPWLRPRVVETHYLPTFVAKSLNQTTVP 157          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE_DICDI (Glutamine-dependent NAD(+) synthetase OS=Dictyostelium discoideum GN=nadsyn1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.808e-40
Identity = 83/149 (55.70%), Postives = 103/149 (69.13%), Query Frame = 3
Query:   81 MRLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLG-DWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISE 524
            M+ + +ATCNLNQWAMDF  N++ I ESI  AK  GA  RLGPELEI GYGCEDHFLE DT+ H W+ L  +L   + T  IL   GMPV++   RYNC+V+ LN+KI +I+PK  +A DGNYRE RWFT W +   +E F LP  IS+
Sbjct:    1 MKTVTLATCNLNQWAMDFKGNLERIIESINIAKSKGAKYRLGPELEICGYGCEDHFLEQDTMLHCWQSLAVILKDPELTKDILVDVGMPVLHKDVRYNCRVILLNQKIYLIQPKKAMAMDGNYREGRWFTPWIKPRVVETFYLPRIISQ 149          
BLAST of CF835670 vs. ExPASy Swiss-Prot
Match: NADE1_DROME (Probable glutamine-dependent NAD(+) synthetase OS=Drosophila melanogaster GN=CG9940 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.028e-40
Identity = 74/155 (47.74%), Postives = 106/155 (68.39%), Query Frame = 3
Query:   84 RLLKVATCNLNQWAMDFDCNMKNIKESIARAKEAGAVIRLGPELEITGYGCEDHFLELDTITHAWECLKDLLLGDWTDGILCSFGMPVINGSERYNCQVLCLNRKIIMIRPKLWLANDGNYRELRWFTAWKQKDQLEDFLLPHEISEALCQKSIP 548
            R + VA   LNQWA+DF+ NM  I +SI  AK+ GA  R GPELE+ GY CEDHF E DT  H+WE L ++++    + +L   GMPV++ +  YNC+V   NR+I++IRPK+ + +DGNYRE RWFTAW +  Q E+++LP  I++   Q+++P
Sbjct:    3 RKVTVAVSTLNQWALDFEGNMVRILQSILEAKDMGASYRTGPELEVCGYSCEDHFREPDTFLHSWEVLLEVMMSPMCENMLVDVGMPVMHRNVAYNCRVAFFNRQILLIRPKMAMCDDGNYRESRWFTAWTKALQTEEYVLPRMIAQHTGQQTVP 157          
The following BLAST results are available for this feature:
BLAST of CF835670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NADE_YEAST2.438e-4553.25Glutamine-dependent NAD(+) synthetase OS=Saccharom... [more]
NADE1_BOVIN1.338e-4352.90Glutamine-dependent NAD(+) synthetase OS=Bos tauru... [more]
NADE1_HUMAN2.981e-4352.26Glutamine-dependent NAD(+) synthetase OS=Homo sapi... [more]
NADE1_MOUSE3.893e-4352.90Glutamine-dependent NAD(+) synthetase OS=Mus muscu... [more]
NADE1_MACFA5.084e-4352.90Glutamine-dependent NAD(+) synthetase OS=Macaca fa... [more]
NADE1_CHICK6.640e-4352.26Glutamine-dependent NAD(+) synthetase OS=Gallus ga... [more]
NADE1_RAT2.523e-4252.26Glutamine-dependent NAD(+) synthetase OS=Rattus no... [more]
NADE_SCHPO9.588e-4249.68Putative glutamine-dependent NAD(+) synthetase OS=... [more]
NADE_DICDI1.808e-4055.70Glutamine-dependent NAD(+) synthetase OS=Dictyoste... [more]
NADE1_DROME4.028e-4047.74Probable glutamine-dependent NAD(+) synthetase OS=... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01K20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01K20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835670 ID=CF835670; Name=CF835670; organism=Citrus sinensis; type=EST; length=550bp
CTTGTCTCAACTCTCAATATCGATTGCTCACTCGCTGTGTTCCCCAAGTC
AACTCATCAACTCGGCCTGACATTTGAAAGATGAGGCTGTTAAAGGTGGC
CACGTGTAACTTGAACCAGTGGGCGATGGACTTCGATTGTAACATGAAGA
ACATTAAGGAGTCAATTGCTAGGGCAAAAGAAGCCGGTGCTGTCATTCGG
CTTGGTCCTGAGCTTGAAATCACTGGTTACGGCTGTGAAGATCACTTCTT
GGAACTCGATACTATCACTCATGCATGGGAGTGCTTGAAAGATTTATTGC
TAGGTGATTGGACAGATGGGATATTATGTAGCTTTGGAATGCCAGTGATT
AACGGATCGGAGCGTTATAATTGTCAAGTATTGTGTTTAAACAGGAAAAT
TATAATGATACGTCCTAAACTGTGGCTTGCAAATGATGGAAATTACAGGG
AGCTTCGGTGGTTTACAGCATGGAAGCAAAAAGATCAGCTTGAGGACTTC
CTACTTCCGCATGAAATTTCTGAGGCTTTGTGTCAGAAATCAATTCCTTT
back to top