CF835767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: GDAP2_DANRE (Ganglioside-induced differentiation-associated protein 2 OS=Danio rerio GN=gdap2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.461e-12 Identity = 43/145 (29.66%), Postives = 75/145 (51.72%), Query Frame = -2 Query: 329 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 754 G D GR ++ ++G+ P L+ +E Y V + K + ++Y HT + N + L+ +YD + A K+NL+A YFVHP ++++ F TF V GL K+ ++ L L+ V +++IP FV+++D Sbjct: 353 GVDLCGRTVMVVVGRNIPVMLIDMEKALLYFIH-VMDHITVKEYVMVYFHT-LTGEHNHLDTDFLKKLYDIVDAKFKKNLRAFYFVHPTFRSKVSTWFFTTF------SVSGLKDKVHHIENLQQLFTCVLPEQIDIPPFVLEYD 489
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: GDAP2_RAT (Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus GN=Gdap2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12 Identity = 41/145 (28.28%), Postives = 74/145 (51.03%), Query Frame = -2 Query: 329 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 754 G D GR ++ ++G+ P L+ ++ Y V + K + ++Y HT + N + L+ +YD + K NL+AVYFVHP ++++ F TF V GL K+ +V+ L L+ + +++ P FV+++D Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTF------SVSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYD 480
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: GDAP2_MOUSE (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12 Identity = 41/145 (28.28%), Postives = 74/145 (51.03%), Query Frame = -2 Query: 329 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 754 G D GR ++ ++G+ P L+ ++ Y V + K + ++Y HT + N + L+ +YD + K NL+AVYFVHP ++++ F TF V GL K+ +V+ L L+ + +++ P FV+++D Sbjct: 345 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTF------SVSGLKDKIHHVDSLQQLFSAISPEQIDFPPFVLEYD 481
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: GDAP2_MACFA (Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis GN=GDAP2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12 Identity = 41/145 (28.28%), Postives = 74/145 (51.03%), Query Frame = -2 Query: 329 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 754 G D GR ++ ++G+ P L+ ++ Y V + K + ++Y HT + N + L+ +YD + K NL+AVYFVHP ++++ F TF V GL K+ +V+ L L+ + +++ P FV+++D Sbjct: 308 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTF------SVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYD 444
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: GDAP2_HUMAN (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12 Identity = 41/145 (28.28%), Postives = 74/145 (51.03%), Query Frame = -2 Query: 329 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 754 G D GR ++ ++G+ P L+ ++ Y V + K + ++Y HT + N + L+ +YD + K NL+AVYFVHP ++++ F TF V GL K+ +V+ L L+ + +++ P FV+++D Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTF------SVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYD 480
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: GDAP2_BOVIN (Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.908e-12 Identity = 41/145 (28.28%), Postives = 74/145 (51.03%), Query Frame = -2 Query: 329 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 754 G D GR ++ ++G+ P L+ ++ Y V + K + ++Y HT + N + L+ +YD + K NL+AVYFVHP ++++ F TF V GL K+ +V+ L L+ + +++ P FV+++D Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTF------SVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYD 480
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: GDAP2_XENTR (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.255e-12 Identity = 44/145 (30.34%), Postives = 74/145 (51.03%), Query Frame = -2 Query: 329 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 754 G D GR ++ ++G+ P L+ +E Y + + K + ++Y HT + N L+++YD + K+NL+A+YFVHP ++++ F TF V GL K+ V L L+ V ++EIP FV+D+D Sbjct: 343 GVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIHMM-DHVAAKEYVLVYFHT-LTGEHNHPDSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTTF------TVSGLKDKVHQVESLHQLFSAVPPEQIEIPPFVLDYD 479
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: GDAP2_XENLA (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.255e-12 Identity = 44/145 (30.34%), Postives = 75/145 (51.72%), Query Frame = -2 Query: 329 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHD 754 G D GR ++ ++G+ P L+ +E Y + + K + ++Y HT + N + L+++YD I K+NL+A+YFVHP ++++ F TF V GL K+ V L L+ + ++EIP FV+D+D Sbjct: 343 GVDNCGRSVMVVVGRNIPVLLIDMEKALLYFIHMM-DHVTAKDYVLVYFHT-LTGEHNHLDSDFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTWFFTTF------TVSGLKDKVHQVESLHQLFTAIPPEQIEIPPFVLDYD 479
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: RHG01_MOUSE (Rho GTPase-activating protein 1 OS=Mus musculus GN=Arhgap1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = -2 Query: 317 IDRLEIFKIHGRDKQGRKILRIIG-KFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLE 784 I R +I ++ G DK GRKI+ + P+ L L YL + + + +T+LY+H G+ S+N +S LR Y K+N++A+Y VHP + + L F L G K+ YVN L L EHV+ ++ IP V+ +D+ L+ Sbjct: 67 IARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYL-KHTLDQYVESDYTLLYLHHGLT-SDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFG---RKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLK 218
BLAST of CF835767 vs. ExPASy Swiss-Prot
Match: RHG01_HUMAN (Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = -2 Query: 317 IDRLEIFKIHGRDKQGRKILRIIG-KFFPARLLSVEVLKRYLAERVYPRLGKKAFTVLYVHTGVQRSENFVGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLFFNGVGGLYGKLRYVNRLDYLWEHVRRHEVEIPEFVMDHDEDLE 784 I R +I ++ G DK GRKI+ + P+ L L YL + + + +T+LY+H G+ S+N +S LR Y K+N++A+Y VHP + + L F L G K+ YVN L L EHV+ ++ IP V+ +D+ L+ Sbjct: 67 IARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYL-KHTLDQYVESDYTLLYLHHGLT-SDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFG---QKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLK 218 The following BLAST results are available for this feature:
BLAST of CF835767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835767 ID=CF835767; Name=CF835767; organism=Citrus sinensis; type=EST; length=797bpback to top |