CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1136 contig Csv1_Contig1136:1..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.979e-44
Identity = 95/237 (40.08%), Postives = 148/237 (62.45%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLAD--DTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            MD L  +  LL + + +  L     G+ K          +IGNL  LG  PH+SLA+LAKI+GPI+SL+LG++TT+V+SSA  A+ +L+  D +F  R V DA+  + H    +  L V T W+ LR++ + +IF+   L+A Q LR KK++ L++Y  +   + + + I +  F TSLNLLSNTIFS DL D  + + ++F++ +++I+V+  K NL D FP+LK++D QGI+  M
Sbjct:    1 MDFLIIVSTLLLSYILIWVLGV---GKPKNLPPGPTRLPIIGNLHLLGALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFRTSLNLLSNTIFSKDLTDPYEDSGKEFREVITNIMVDSAKTNLVDVFPVLKKIDPQGIKRGM 234          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.870e-38
Identity = 92/244 (37.70%), Postives = 141/244 (57.79%), Query Frame = 1
Query:   25 ILSLTKMDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTT-WKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLA--DDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            I+S   + +L C I   F  +   A S  S GR            +IGN+ ++G+ PH S A+LAKIYGPI+SLK G + +VV++S   A+ +L+ HD     R   D+I    H E  ++ LP S+  W+ LRKL    +F+ Q+ +A + LR KK++ L+S++ E+    +A+DIS+  + T LN++SN +FSVDL   D     +F+DTV   +   GKP+ +++FP +  LDLQG R  M
Sbjct:    3 IISGQALFLLFCFISSCFL-ISTTARSRRSSGRAATLPPGPPRLPIIGNIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNILFSVDLGSYDSKKSNEFQDTVIGAMEAAGKPDAANYFPFMGFLDLQGNRKAM 245          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.607e-37
Identity = 81/198 (40.91%), Postives = 123/198 (62.12%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLA---DDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSR 744
            ++GN+ +LG  PH+SLA  +K YGPI+SLKLG +T VV+SS   AK  L+ HD     R   DA+    H++  +V +P S  W+ L+K    ++ + Q LDA Q LR +K++ L+S V E    G+AID+++  F TS N++SN +FSVDLA    +++  +F +TV  +    G PN+ D+F  ++ LDLQG R +
Sbjct:   47 LVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERGEAIDLARASFVTSFNIISNALFSVDLATYDSNSSSYEFHNTVVHLTDIAGIPNVGDYFQYMRFLDLQGTRKK 244          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.900e-36
Identity = 79/199 (39.70%), Postives = 126/199 (63.32%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTT-WKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLA--DDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            +IGN+  +G  PH S A+L+K YGPI+SLK G + TVVV+S   A+ +L+ +D    +R   ++I    H++  +V LP S++ W+ LRKL    +F+ Q+++A + LR  K+K L+S++ E+    +A+DIS+  F T+LN++SN +FSVDL   D      F+DTV  ++  +G P+ ++ FP L  LDLQG R  +
Sbjct:   47 IIGNIHLVGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNIISNILFSVDLGNYDSNKSGVFQDTVIGVMEAVGNPDAANFFPFLGFLDLQGNRKTL 245          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.935e-35
Identity = 85/240 (35.42%), Postives = 137/240 (57.08%), Query Frame = 1
Query:   25 ILSLTKMDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTT-WKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKF---KDTVSSILVEIGKPNLSDHFPLLKRLDLQG 732
            I+S   + +L C I   F           SRG             +IGN+  +G+ PH+S AEL+K YGP++SLKLG + TVV++S   A+ +L+ HD     R   +A+    H +  +V LP S+  W+ LR+L    + + Q+++A + LR  K+K L+S++ E+    +++DIS+V F T+LN++SN +FSVDL     +      +DTV S++   G P+ +++FP L+ LDLQG
Sbjct:    3 IISGQALLLLFCFILSCFLIFTTTRSGRISRGATALPPGPPRLP-IIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNIISNILFSVDLGSYNAKASINGVQDTVISVMDAAGTPDAANYFPFLRFLDLQG 241          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.616e-32
Identity = 72/201 (35.82%), Postives = 118/201 (58.71%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRA---GKAIDISQVVFNTSLNLLSNTIFSVDLADDTTER--KFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            + GN+ ELG +P+K +A L + YGP+L LKLG   T+VV +A  ++ + ++HD SF NR++ D    H + +  + I P    W+  R++C + +F  +K+   + +RRK + N+L ++E+   +   G  I++++ VF  S N+L N I S DLAD  +E   +F   +  I    G  N+SD FP LK+ DLQ +R +M
Sbjct:   44 IFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKEANSAEKGSGIEVTRFVFLASFNMLGNLILSKDLADLESEEASEFFIAMKRINEWSGIANVSDIFPFLKKFDLQSLRKKM 244          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.876e-29
Identity = 70/200 (35.00%), Postives = 115/200 (57.50%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLAD----DTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            ++GNLL+LGEKPH   AELA+ YG I +LK+G  T VV S++  A  IL+ HD     R V  +     H E  +V    + TWKNLRK+C   +FT + +++   +R KK + ++ Y+ +  + G+ + I +V+F T +N+  N IFS ++ +    ++   +FK+ +  +L      N +D+FP+L + DL G R  +
Sbjct:   38 IVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGXPNSGSSEFKEYLWRMLELGNSTNPADYFPMLGKFDLFGQRKEV 235          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.876e-29
Identity = 70/200 (35.00%), Postives = 115/200 (57.50%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLAD----DTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            ++GNLL+LGEKPH   AELA+ YG I +LK+G  T VV S++  A  IL+ HD     R V  +     H E  +V    + TWKNLRK+C   +FT + +++   +R KK + ++ Y+ +  + G+ + I +V+F T +N+  N IFS ++ +    ++   +FK+ +  +L      N +D+FP+L + DL G R  +
Sbjct:   37 IVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGDPNSGSSEFKEYLWRMLELGNSTNPADYFPMLGKFDLFGQRKEV 234          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.372e-27
Identity = 65/203 (32.02%), Postives = 115/203 (56.65%), Query Frame = 1
Query:  166 GNLLEL-GEKPHKSLAELAKIYGPILSLKLGE-VTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRA----GKAIDISQVVFNTSLNLLSNTIFSVDLADDTTER---KFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            GN+ +L G  P+K +A L + YGPIL LK+G  + T+V+ +A  A  + ++HD SF +R + D    H + +  M + P    W+  R++C + +F  ++++    +R++ +  +L   EE   +    G+ I++++ +F  S N++ N IFS DL  D   +   +F + +  I+   G PN+SD FP LK  D+QG+R +M
Sbjct:    2 GNMFDLAGSAPYKKIACLKEKYGPILWLKIGSSMNTMVIQTANSASELFRNHDVSFSDRPIVDVNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESVDKMLRLDEEKASSSGGGGEGIEVTRYMFLASFNMVGNMIFSKDLVTDPESKQGSEFFNAMIGIMEWAGVPNISDIFPCLKMFDVQGLRKKM 204          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.257e-26
Identity = 76/243 (31.28%), Postives = 129/243 (53.09%), Query Frame = 1
Query:   43 MDMLSCIIW-LLFTCVFVMALSSFSRGRKKXXXXXXXXXX-VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLN-----LLSNTIFSVDLAD-DTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            M++LS I++ ++F+ +    L SF R R             +IGNL+ LG KPH+S A +A+ YGP++ LK+G V  VV +SA +A   L+ HD++F +R          +N   +V  P    W+ LRK+C++H+F+T+ LD  + +R+ ++K L   +       K + + Q++   + N     +L   +F+    D D    +FK  V  ++V  G  N+ D  P L  LD+QG+ ++M
Sbjct:    1 MEILSLILYTVIFSFLLQFILRSFFRKRYPLPLPPGPKPWPIIGNLVHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRALAS--AGQKPVKLGQLLNVCTTNALARVMLGKRVFADGSGDVDPQAAEFKSMVVEMMVVAGVFNIGDFIPQLNWLDIQGVAAKM 241          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C76B1_HELTU2.979e-4440.087-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C4_ARATH1.870e-3837.70Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH4.607e-3740.91Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH3.900e-3639.70Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH1.935e-3535.42Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76A2_SOLME2.616e-3235.82Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C80B2_ESCCA7.876e-2935.00(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA7.876e-2935.00(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C76A1_SOLME7.372e-2732.02Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
F3PH_PETHY1.257e-2631.28Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
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