CF835840

Overview
NameCF835840
Unique NameCF835840
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1137 contig Csv1_Contig1137:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835840 vs. ExPASy Swiss-Prot
Match: MTA70_ORYSJ (Probable N6-adenosine-methyltransferase MT-A70-like OS=Oryza sativa subsp. japonica GN=Os02g0672600 PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.015e-96
Identity = 171/230 (74.35%), Postives = 185/230 (80.43%), Query Frame = 2
Query:   14 QQNLRTXXXXXXXXXXMLNKKTYKESQRSKAGEELLDLIQRPTAKETAVAAKFKSKGGSQVKEYCSSLTKEDCRLKTGSFAACEKVHFRRIIAPHTDISLGDCSFLDTCRHMKTCKYIHYELDPERDXXXXXXXXXXXXXXXXXXXRPEYCSEVELGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRNLNVPALQTDGLIFLWVTGRAMELGRE 703
            QQ  ++          +LNKKTY+E Q +K GEELLDLI RPTAKETAVAAKFK+KGGSQ+KEYC++LTKEDCR ++GSF AC+KVHFRRIIAPHTD +LGDCSFLDTCRH KTCKY+HYELD   D                   R EYCSEVELGE QWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMR LNVPALQTDGLIFLWVTGRAMELGRE
Sbjct:  316 QQKQKSEEDELKDLELLLNKKTYREKQNTKTGEELLDLIHRPTAKETAVAAKFKTKGGSQLKEYCTNLTKEDCRRQSGSFVACDKVHFRRIIAPHTDTNLGDCSFLDTCRHTKTCKYVHYELDQTPD-IPPMMAGALAPPRQIRLQRAEYCSEVELGEAQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRTLNVPALQTDGLIFLWVTGRAMELGRE 544          
BLAST of CF835840 vs. ExPASy Swiss-Prot
Match: MTA70_ARATH (N6-adenosine-methyltransferase MT-A70-like OS=Arabidopsis thaliana GN=EMB1706 PE=1 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 3.162e-90
Identity = 161/229 (70.31%), Postives = 177/229 (77.29%), Query Frame = 2
Query:   17 QNLRTXXXXXXXXXXMLNKKTYKESQRSKAGEELLDLIQRPTAKETAVAAKFKSKGGSQVKEYCSSLTKEDCRLKTGSFAACEKVHFRRIIAPHTDISLGDCSFLDTCRHMKTCKYIHYELDPERDXXXXXXXXXXXXXXXXXXXRPEYCSEVELGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRNLNVPALQTDGLIFLWVTGRAMELGRE 703
            Q LR+          +L+KK++KE Q+S+ GEELLDLI RPTAKE A AAKFKSKGGSQVK YC  LTKEDCRL++GS  AC K HFRR+IA HTD+SLGDCSFLDTCRHMKTCKY+HYELD                       R +YCSE ELGE QWINCDIR+FRMDILG FGV+MADPPWDIHMELPYGTMADDEMR LNVP+LQTDGLIFLWVTGRAMELGRE
Sbjct:  308 QKLRSEEEDLKDVEALLSKKSFKEKQQSRTGEELLDLIHRPTAKEAATAAKFKSKGGSQVKYYCRYLTKEDCRLQSGSHIACNKRHFRRLIASHTDVSLGDCSFLDTCRHMKTCKYVHYELD-------MADAMMAGPDKALKPLRADYCSEAELGEAQWINCDIRSFRMDILGTFGVVMADPPWDIHMELPYGTMADDEMRTLNVPSLQTDGLIFLWVTGRAMELGRE 529          
BLAST of CF835840 vs. ExPASy Swiss-Prot
Match: MTA70_MEDTR (Putative N6-adenosine-methyltransferase MT-A70-like OS=Medicago truncatula GN=MtrDRAFT_AC148918g15v1 PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.582e-87
Identity = 152/233 (65.24%), Postives = 173/233 (74.25%), Query Frame = 2
Query:    5 NNRQQNLRTXXXXXXXXXXMLNKKTYKESQRSKAGEELLDLIQRPTAKETAVAAKFKSKGGSQVKEYCSSLTKEDCRLKTGSFAACEKVHFRRIIAPHTDISLGDCSFLDTCRHMKTCKYIHYELDPERDXXXXXXXXXXXXXXXXXXXRPEYCSEVELGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRNLNVPALQTDGLIFLWVTGRAMELGRE 703
            N  QQ +            ++NKK+++E Q+ +  +ELL +IQ P+ +E AVAAKFK+KGGSQ++ YC   TKEDCR +TGSF AC K+HFRRIIA HTDI+LGDC FL TCRHM TCKY+HYE DP  D                   R EYCSE ELG+PQWINCDIRNFRMDILG+FGVIMADPPWDIHMELPYGTMADDEMR LNVPALQT GLIFLWVTGRAMELGRE
Sbjct:  224 NQNQQQIAKCSMNLEDVDALINKKSFREMQKYETAKELLKIIQTPSIREAAVAAKFKTKGGSQMRPYCDLPTKEDCRRRTGSFIACNKLHFRRIIALHTDINLGDCPFLRTCRHMNTCKYVHYEEDPTPDLPPTMMCAPPPPLKPLKQQRAEYCSEAELGQPQWINCDIRNFRMDILGKFGVIMADPPWDIHMELPYGTMADDEMRTLNVPALQTHGLIFLWVTGRAMELGRE 456          
BLAST of CF835840 vs. ExPASy Swiss-Prot
Match: MTA70_HUMAN (N6-adenosine-methyltransferase 70 kDa subunit OS=Homo sapiens GN=METTL3 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.361e-61
Identity = 114/215 (53.02%), Postives = 143/215 (66.51%), Query Frame = 2
Query:   62 MLNKKTYKESQRSKAGEELLDLIQRPTAKETAVAAKFKSKGGSQVKEYCSSLTKEDCRLKTGSFAACEKVHFRRIIAPHTDISLGDCSFLDTCRHMKTCKYIHYELDPERDXXXXXXXXXXXXXXXXXXXRPEYCSEVE-LGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRNLNVPALQTDGLIFLWVTGRAMELGRE 703
            +LN+++ KE Q  K  +E+L+L+   TAKE ++  KF+S+G +QV+E+C   TKE+C   + +   C K+HFRRII  HTD SLGDCSFL+TC HM TCKY+HYE+D   D                        S  + L  PQWI CDIR   + ILG+F V+MADPPWDIHMELPYGT+ DDEMR LN+P LQ DG +FLWVTGRAMELGRE
Sbjct:  228 LLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACMDSEAPGSKDHTPSQELALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIPVLQDDGFLFLWVTGRAMELGRE 442          
BLAST of CF835840 vs. ExPASy Swiss-Prot
Match: MTA70_MOUSE (N6-adenosine-methyltransferase 70 kDa subunit OS=Mus musculus GN=Mettl3 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.028e-61
Identity = 114/215 (53.02%), Postives = 143/215 (66.51%), Query Frame = 2
Query:   62 MLNKKTYKESQRSKAGEELLDLIQRPTAKETAVAAKFKSKGGSQVKEYCSSLTKEDCRLKTGSFAACEKVHFRRIIAPHTDISLGDCSFLDTCRHMKTCKYIHYELDPERDXXXXXXXXXXXXXXXXXXXRPEYCSEVE-LGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRNLNVPALQTDGLIFLWVTGRAMELGRE 703
            +LN+++ KE Q  K  +E+L+L+   TAKE ++  KF+S+G +QV+E+C   TKE+C   + +   C K+HFRRII  HTD SLGDCSFL+TC HM TCKY+HYE+D   D                        S  + L  PQWI CDIR   + ILG+F V+MADPPWDIHMELPYGT+ DDEMR LN+P LQ DG +FLWVTGRAMELGRE
Sbjct:  228 LLNQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDYGTKEECMKASDADRPCRKLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDACVDSESPGSKEHMPSQELALTQSVGGDSSADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIPVLQDDGFLFLWVTGRAMELGRE 442          
BLAST of CF835840 vs. ExPASy Swiss-Prot
Match: MTA70_DROME (Probable N6-adenosine-methyltransferase MT-A70-like protein OS=Drosophila melanogaster GN=CG5933 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.065e-45
Identity = 101/210 (48.10%), Postives = 122/210 (58.10%), Query Frame = 2
Query:   74 KTYKESQRSKAGEELLDLIQRPTAKETAVAAKFKSKGGSQVKEYCSSLTKEDCRLKTGSFAACEKVHFRRIIAPHTDISLGDCSFLDTCRHMKTCKYIHYELDPERDXXXXXXXXXXXXXXXXXXXRPEYCSEVELGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRNLNVPALQTDGLIFLWVTGRAMELGRE 703
            K  K    ++ GE + ++I    A+        +S  GS     CSS T + C           K+HF++II  HTD SLGDCSFL+TC HM TCKY+HYE+D                       +    S   L  PQWI CD+R   M +LG+F V+MADPPWDIHMELPYGTM+DDEMR L VPALQ DGLIFLWVTGRAMELGR+
Sbjct:  274 KVPKTESAAEDGEIIAEVINNCEAESQ------ESTDGSDT---CSSETTDKCT----------KLHFKKIIQAHTDESLGDCSFLNTCFHMATCKYVHYEVDT----LPHINTNKPTDVKTKLSLKRSVDSSCTLYPPQWIQCDLRFLDMTVLGKFAVVMADPPWDIHMELPYGTMSDDEMRALGVPALQDDGLIFLWVTGRAMELGRD 460          
BLAST of CF835840 vs. ExPASy Swiss-Prot
Match: IME4_YEAST (N6-adenosine-methyltransferase IME4 OS=Saccharomyces cerevisiae GN=IME4 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31
Identity = 70/156 (44.87%), Postives = 88/156 (56.41%), Query Frame = 2
Query:  266 KVHFRRIIAPHTDISLGDCSFLDTCRHMKTCKYIHY----------ELDPERDXXXXXXXXXXXXXXXXXXXRPEYCSEVELGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRNLNVPALQTDGLIFLWVTGRAMELGRE 703
            K+HF   I P TDISLGDCS+LDTC  + TC+YIHY            D E                        +C +  L   QWI CD+R F   +LG+F V++ADP W+IHM LPYGT  D E+  L +  LQ +G+IFLWVTGRA+ELG+E
Sbjct:  241 KIHFIPNIKPQTDISLGDCSYLDTCHKLNTCRYIHYLQYIPSCLQERADRETASENKRIRSNVSIPFYTLGNCSAHCIKKAL-PAQWIRCDVRKFDFRVLGKFSVVIADPAWNIHMNLPYGTCNDIELLGLPLHELQDEGIIFLWVTGRAIELGKE 395          
The following BLAST results are available for this feature:
BLAST of CF835840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MTA70_ORYSJ1.015e-9674.35Probable N6-adenosine-methyltransferase MT-A70-lik... [more]
MTA70_ARATH3.162e-9070.31N6-adenosine-methyltransferase MT-A70-like OS=Arab... [more]
MTA70_MEDTR5.582e-8765.24Putative N6-adenosine-methyltransferase MT-A70-lik... [more]
MTA70_HUMAN2.361e-6153.02N6-adenosine-methyltransferase 70 kDa subunit OS=H... [more]
MTA70_MOUSE4.028e-6153.02N6-adenosine-methyltransferase 70 kDa subunit OS=M... [more]
MTA70_DROME1.065e-4548.10Probable N6-adenosine-methyltransferase MT-A70-lik... [more]
IME4_YEAST1.950e-3144.87N6-adenosine-methyltransferase IME4 OS=Saccharomyc... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01P19_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835840 ID=CF835840; Name=CF835840; organism=Citrus sinensis; type=EST; length=705bp
AGGGAACAATAGGCAGCAGAATTTGAGAACGGAAGAGGATGATTTGATTG
ACATTGAAGAAATGTTGAATAAGAAGACTTACAAGGAGTCACAAAGGTCC
AAGGCCGGTGAGGAGTTGTTGGATTTGATTCAGCGACCAACTGCTAAGGA
AACTGCTGTGGCTGCCAAGTTCAAGAGCAAAGGTGGTTCACAAGTGAAGG
AGTATTGCTCGTCACTGACCAAAGAGGATTGCCGACTTAAAACTGGTTCT
TTTGCTGCTTGTGAGAAGGTTCATTTTCGACGAATAATTGCTCCACATAC
TGACATTAGTTTAGGTGACTGTTCCTTTCTTGATACCTGCCGGCACATGA
AGACATGCAAGTACATCCATTATGAGCTGGACCCAGAGAGAGATTTACCA
CCTGCACTGATGGGTGCTGGTCTTCCTCCCCAGAAACCGTTGAAGCCTCA
GCGTCCTGAATATTGTTCTGAAGTAGAACTCGGTGAACCACAATGGATTA
ATTGTGATATTCGTAATTTTAGAATGGACATTTTAGGACAATTTGGAGTT
ATAATGGCAGATCCTCCCTGGGATATCCATATGGAATTGCCTTATGGGAC
GATGGCTGATGACGAAATGCGCAATCTTAATGTTCCTGCATTGCAGACTG
ATGGTCTGATTTTCCTCTGGGTCACTGGACGTGCAATGGAGCTTGGACGT
GAATG
back to top