CF835851

Overview
NameCF835851
Unique NameCF835851
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:314..888. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835851 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 2.494e-14
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = -1 
Query:  265 IVKVSTDVNRRFPVKVSVKPCK--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKGGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGD 576
            +V+VSTD+N  F    +  PC+     +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+      RR L + D
Sbjct:  104 VVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207
[Close]
BLAST of CF835851 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.556e-14
Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = -1 
Query:  259 IVKVSTDVNRRFPVKVSVKPCKEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKGGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGDHE 576
            +V+VSTDVN  F V +  + C    +W++D+YD+      + T G +G PG  TL +WFKIEK G       Y    CPSVC SC   C+ IG  + D  +  L + D+E
Sbjct:   97 VVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201
The following BLAST results are available for this feature:
BLAST of CF835851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MIRA_RICDU2.494e-1437.27Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC5.556e-1439.0921 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_02A04_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835851 ID=CF835851; Name=CF835851; organism=Citrus sinensis; type=EST; length=576bp
TTTTTTTTTTTTTTTTTATCATAACATGAGTAGAGATTAACAACCTCCTT
TAGATCACAGGNGGATGTTATTTTTATTCTGTAATACCCATAAAAGGTTA
CTAGCCTGGTCTATTATTTAGAATGATACAGCTAAGTTCATTCATTACGC
GGTCATTGATATTGCTTCAGCAGCTTCAAAAAACCTTGATATTGCGTTAG
CAGCTTGAAGTAGCCTTGAGCTTTCCTCTGATGGAAAAAACAGAACATTC
AAAGCCGGTTCATGATCACCAACTAGAAGCAGACGTCGAACGCCATCCTT
AGTTGAAACGCCAATTTTGTTGCAGCGTCTAGGACAAGATAGACAGACAC
TCGGACAATGGACAATATTGTATACACCACCATATGAAAAATTTCCACCT
TTCTCAATCTTAAACCAATTTAGCAACGTTTCAGCTCCTGGGTGGCCCTC
ACTTCCGCCGGTTACAATTAATGGATCGTCATAGCTATCAACTTTCCACA
ATGGTTCTTCCTTACAGGGCTTAACAGAAACTTTTACGGGGAATCTCCGG
TTGACATCAGTGGATACCTTGACAAT
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