CF835866

Overview
NameCF835866
Unique NameCF835866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8587 contig Csv1_Contig8587:470..1255. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835866 vs. ExPASy Swiss-Prot
Match: PPA8_ARATH (Purple acid phosphatase 8 OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 8.183e-77
Identity = 130/183 (71.04%), Postives = 153/183 (83.61%), Query Frame = -3
Query:  236 LCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQENEVDLYINGHDHCLERISSTESGIQFLTSGGGSKAWKGDIDWWNPKEDKFYYDGQGFMSVQITPTEVDVAFYNIFGNVIHKWSTSK 784
            +CLRS++VNAEI +  FVDTTPFVD+YF +P+DHVYDW G+ PR  YL +LL DVD AL+ES AKWKIVVGHHTIKS+GHHGNT EL  QLLPIL+ NEVDLYINGHDHCLE ISS  SGIQF+TSGGGSKAWKGD++ WNP+E +FYYDGQGFMSV  +  E+ V FY+  G+V+H+WST K
Sbjct:  146 ICLRSYVVNAEIVDIFFVDTTPFVDRYFDEPKDHVYDWRGVLPRNKYLNSLLTDVDVALQESMAKWKIVVGHHTIKSAGHHGNTIELEKQLLPILEANEVDLYINGHDHCLEHISSINSGIQFMTSGGGSKAWKGDVNDWNPQEMRFYYDGQGFMSVYTSEAELRVVFYDGLGHVLHRWSTLK 328          
BLAST of CF835866 vs. ExPASy Swiss-Prot
Match: PPA3_ARATH (Purple acid phosphatase 3 OS=Arabidopsis thaliana GN=PAP3 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.801e-74
Identity = 125/180 (69.44%), Postives = 151/180 (83.89%), Query Frame = -3
Query:  248 LCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQENEVDLYINGHDHCLERISSTESGIQFLTSGGGSKAWK-GDIDWWNPKEDKFYYDGQGFMSVQITPTEVDVAFYNIFGNVIHKW 784
            +C+RSFIVNAEI +  FVDTTPFVDKYF  P  HVYDWSG+ PR++YL NLLK++D AL+ES AKWKIV+GHHTIKS+GHHGNT EL   LLPILQ NEVDLY+NGHDHCLE ISS +S IQF+TSGGGSKAWK GD+++  P+E +FYYDGQGFMSV ++  E+ V FY++FG+V+H W
Sbjct:  175 VCMRSFIVNAEIVDLFFVDTTPFVDKYFIQPNKHVYDWSGVLPRQTYLNNLLKELDVALRESVAKWKIVIGHHTIKSAGHHGNTIELEKHLLPILQANEVDLYVNGHDHCLEHISSVDSNIQFMTSGGGSKAWKGGDVNYVEPEEMRFYYDGQGFMSVHVSEAELRVVFYDVFGHVLHHW 354          
BLAST of CF835866 vs. ExPASy Swiss-Prot
Match: PPA4_ARATH (Purple acid phosphatase 4 OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.012e-71
Identity = 121/187 (64.71%), Postives = 151/187 (80.75%), Query Frame = -3
Query:  224 LCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQENEVDLYINGHDHCLERISSTESGIQFLTSGGGSKAWKGDIDWWNPKEDKFYYDGQGFMSVQITPTEVDVAFYNIFGNVIHKWSTSKQLYS 784
            +C+RSFIV+AEIAE  FVDTTPFVD YF  P+D  YDWSG+ PRKSYL  +L +++  L+ES+AKWKIVVGHH IKS+  HGNT EL   LLPIL+ N+VDLY+NGHDHCL+ IS+++S IQFLTSGGGSKAW+G  +W  P++ KF+YDGQGFMSV+IT +E+ V FY++ GN +HKW TSK L S
Sbjct:  147 ICMRSFIVDAEIAELFFVDTTPFVDAYFLSPQDQTYDWSGVSPRKSYLQTILTELEMGLRESSAKWKIVVGHHAIKSASIHGNTKELESLLLPILEANKVDLYMNGHDHCLQHISTSQSPIQFLTSGGGSKAWRGYYNWTTPEDMKFFYDGQGFMSVKITRSELSVVFYDVSGNSLHKWDTSKMLDS 333          
BLAST of CF835866 vs. ExPASy Swiss-Prot
Match: PPA17_ARATH (Purple acid phosphatase 17 OS=Arabidopsis thaliana GN=PAP17 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.488e-66
Identity = 112/187 (59.89%), Postives = 147/187 (78.61%), Query Frame = -3
Query:  230 LCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQENEVDLYINGHDHCLERISSTESGIQFLTSGGGSKAWKGDID--WWNPKEDKFYYDGQGFMSVQITPTEVDVAFYNIFGNVIHKWSTSKQL 784
            +CLRSF+V+AE+ E  FVDTTPFV +Y+T+ + H YDW  +  R SY+  LL+D++ +LK S A+WKIVVGHH ++S GHHG+T ELN +LLPIL+EN VDLY+NGHDHCL+ +S  +S IQFLTSG GSKAW+GDI+    NPK  KFYYDGQGFMS + T ++ ++ FY++FG ++HKW TSKQL
Sbjct:  147 ICLRSFVVDAELVEMFFVDTTPFVKEYYTEADGHSYDWRAVPSRNSYVKALLRDLEVSLKSSKARWKIVVGHHAMRSIGHHGDTKELNEELLPILKENGVDLYMNGHDHCLQHMSDEDSPIQFLTSGAGSKAWRGDINPVTINPKLLKFYYDGQGFMSARFTHSDAEIVFYDVFGEILHKWVTSKQL 333          
BLAST of CF835866 vs. ExPASy Swiss-Prot
Match: PPA7_ARATH (Purple acid phosphatase 7 OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.693e-62
Identity = 107/183 (58.47%), Postives = 139/183 (75.96%), Query Frame = -3
Query:  233 CLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSSGHHGNTHELNLQLLPILQENEVDLYINGHDHCLERISSTESGIQFLTSGGGSKAWKGDIDWWNPKEDKFYYDGQGFMSVQITPTEVDVAFYNIFGNVIHKWSTSKQ 781
            C RSF++++ + +F F DT PFV+KYFT+PEDH YDW  + PR  Y++NLL D+D  +K+S A WK VVGHH IK++G+HG T EL  QLLPIL+EN+VDLYINGHDHCL+ I S     QFLTSGGGSKAW+G +  W+PKE K YYDGQGFMS+ IT ++    +Y++ GNV+H+ S SK+
Sbjct:  143 CRRSFVLSSGMVDFFFADTNPFVEKYFTEPEDHTYDWRNVLPRNKYISNLLHDLDLEIKKSRATWKFVVGHHGIKTAGNHGVTQELVDQLLPILEENKVDLYINGHDHCLQHIGS-HGKTQFLTSGGGSKAWRGHVQPWDPKELKLYYDGQGFMSLHITHSKAKFIYYDVSGNVLHRSSLSKR 324          
The following BLAST results are available for this feature:
BLAST of CF835866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PPA8_ARATH8.183e-7771.04Purple acid phosphatase 8 OS=Arabidopsis thaliana ... [more]
PPA3_ARATH3.801e-7469.44Purple acid phosphatase 3 OS=Arabidopsis thaliana ... [more]
PPA4_ARATH3.012e-7164.71Purple acid phosphatase 4 OS=Arabidopsis thaliana ... [more]
PPA17_ARATH8.488e-6659.89Purple acid phosphatase 17 OS=Arabidopsis thaliana... [more]
PPA7_ARATH5.693e-6258.47Purple acid phosphatase 7 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_02A15_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835866 ID=CF835866; Name=CF835866; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTTTTAAGAAAGACCATCGTAAATACTTTACTTACCAA
CCAAATAGTCAATTACAGTGCTAATAAGTTTTAATGTTATTAATAGCTAG
ACTTGATGGAAATTAACAGTCGGGCCTACAAGATAGAGACCTTGGTCTCT
TTCATACATAAAGAAGTTACAAATACATAACATTACAATGAGAAATAAAA
TAATTAAGATTACCTTAGAGAGCAGAGTAAAGCTGTTTGGAAGTGCTCCA
TTTGTGGATAACGTTGCCAAAAATATTATAAAAAGCAACATCAACTTCGG
TTGGGGTGATTTGAACCGACATAAAACCTTGTCCATCGTAATAGAATTTA
TCTTCTTTTGGATTCCACCAATCAATATCTCCTTTCCATGCCTTTGAGCC
CCCTCCACTCGTCAAAAATTGAATTCCGCTCTCGGTGCTACTGATGCGTT
CCAGGCAATGGTCATGCCCATTAATGTAAAGATCAACTTCGTTTTCCTGA
AGGATTGGGAGGAGTTGCAAGTTAAGCTCATGAGTGTTACCATGATGGCC
GCTACTTTTGATTGTATGGTGACCTACTACTATTTTCCATTTTGCTGTTG
ATTCTTTCAAAGCTGAATCAACATCCTTGAGGAGATTTGCAAGGTAAGAT
TTTCTGGGTTGAATGCCACTCCAATCATAAACATGGTCTTCCGGATCTGT
GAAGTACTTATCAACAAAAGGAGTCGTGTCTACGAAGATAAATTCCGCAA
TTTCAGCGTTAACGATGAAAGACCTCAAGCAAAGCC
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