CF835925
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA22_ARATH (Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.418e-40 Identity = 79/111 (71.17%), Postives = 95/111 (85.59%), Query Frame = -2 Query: 162 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTERVLSVFFR 494 +ELE+LANYLAELTL+EYSFLRF PSL+AASAVFLA+WTL+Q++HPWN TL+HYT Y+ +ELK TVLA+EDLQLNT GC+L A REKY Q KFK VA +T +RV S+F R Sbjct: 326 IELEYLANYLAELTLVEYSFLRFLPSLIAASAVFLARWTLDQTDHPWNPTLQHYTRYEVAELKNTVLAMEDLQLNTSGCTLAATREKYNQPKFKSVAKLTSPKRVTSLFSR 436
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA24_ARATH (Cyclin-A2-4 OS=Arabidopsis thaliana GN=CYCA2-4 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.674e-39 Identity = 76/103 (73.79%), Postives = 89/103 (86.41%), Query Frame = -2 Query: 186 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTE 494 LE+EFLANYL ELTL++Y FL+F PS++AASAVFLAKWTLNQS HPWN TLEHYT+YKAS+LK +V AL+DLQLNT GCSLN+IR KYRQ+KFK VA + E Sbjct: 351 LEMEFLANYLTELTLMDYPFLKFLPSIIAASAVFLAKWTLNQSSHPWNPTLEHYTTYKASDLKASVHALQDLQLNTKGCSLNSIRMKYRQDKFKSVAVFSSGE 453
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA23_ARATH (Cyclin-A2-3 OS=Arabidopsis thaliana GN=CYCA2-3 PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 1.124e-37 Identity = 74/109 (67.89%), Postives = 93/109 (85.32%), Query Frame = -2 Query: 168 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTERVLSVF 494 LE+EFLA+YL ELTL++Y FL+F PS+VAASAVFLAKWT++QS HPWN TLEHYT+YKAS+LK +V AL+DLQLNT GC L+AIR KYRQEK+K VA +T + + ++F Sbjct: 342 LEVEFLASYLTELTLIDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHYTTYKASDLKASVHALQDLQLNTKGCPLSAIRMKYRQEKYKSVAVLTSPKLLDTLF 450
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA21_ARATH (Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 1.917e-37 Identity = 75/111 (67.57%), Postives = 91/111 (81.98%), Query Frame = -2 Query: 162 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTERVLSVFFR 494 +E+E+LANY AELTL EY+FLRF PSL+AASAVFLA+WTL+QS HPWN TL+HYT Y+ S LK TVLA+E+LQLNT G +L AI KY Q+KFK VAT+T ERV ++F R Sbjct: 334 IEMEYLANYFAELTLTEYTFLRFLPSLIAASAVFLARWTLDQSNHPWNQTLQHYTRYETSALKNTVLAMEELQLNTSGSTLIAIHTKYNQQKFKRVATLTSPERVNTLFSR 444
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA21_ORYSJ (Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.614e-36 Identity = 72/109 (66.06%), Postives = 90/109 (82.57%), Query Frame = -2 Query: 168 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTERVLSVF 494 + L +LANYLAELTL++YSFL+F PS+VAASAVFLA+WTL+QS+ PWN TLEHYTSYK+S+++ V AL +LQ NT C LNAIREKYRQ+KF+CVA +T E S+F Sbjct: 381 ITLGYLANYLAELTLIDYSFLKFLPSVVAASAVFLARWTLDQSDIPWNHTLEHYTSYKSSDIQICVCALRELQHNTSNCPLNAIREKYRQQKFECVANLTSPELGQSLF 489
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA13_ORYSJ (Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 8.923e-27 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 162 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTERVLSVFFR 494 L LEFLANY+AEL+LLEY+ L + PSLVAASA+FLAK+ L ++HPWNSTL HYT YK+SEL V AL L G +L AIREKY Q K+K VA + + FFR Sbjct: 377 LHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPAKHPWNSTLAHYTQYKSSELSDCVKALHRLFCVGPGSNLPAIREKYTQHKYKFVAKKPCPPSIPTEFFR 487
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA11_ORYSJ (Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.165e-26 Identity = 64/111 (57.66%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 162 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTERVLSVFFR 494 L LEFLANY+AEL+LLEY+ L + PSLVAASA+FLAK+ L ++HPWNSTL HYT YK+SEL V AL L G +L AIREKY Q K+K VA + + FFR Sbjct: 394 LHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHKYKFVAKKPCPPSIPTEFFR 504
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA31_ARATH (Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.683e-25 Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = -2 Query: 168 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATM-TPTERVLSVF 494 L++EFL +YL+EL++L+Y ++F PS VAASAVFLA++ + +HPWN LE YT YKA +LK V + DL L+ +L AIREKY+Q KFKCVATM E L+VF Sbjct: 241 LQMEFLCSYLSELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMIHDLYLSRKCGALEAIREKYKQHKFKCVATMPVSPELPLTVF 350
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCA12_ORYSJ (Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 2.871e-25 Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = -2 Query: 162 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTERVLSVFFR 494 L LEFLANY+AEL+LLEY+ L + PSLVAASA+FLAK+ L ++HPWNSTL HYT YK+SEL V AL L G +L AIREKY Q K K VA V S FFR Sbjct: 364 LHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHK-KFVAKKHCPPSVPSEFFR 473
BLAST of CF835925 vs. ExPASy Swiss-Prot
Match: CCNAL_DAUCA (G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.749e-25 Identity = 54/110 (49.09%), Postives = 78/110 (70.91%), Query Frame = -2 Query: 165 LELEFLANYLAELTLLEYSFLRFRPSLVAASAVFLAKWTLNQSEHPWNSTLEHYTSYKASELKCTVLALEDLQLNTDGCSLNAIREKYRQEKFKCVATMTPTERVLSVFF 494 L+ EFLANYLAEL+LL+Y L F PSL+AAS FLA++T+ + +PW+ L+ + YK+ +LK VL L DLQ+ G SL+A+R+KY++ KFKCV+T++P + F Sbjct: 229 LKFEFLANYLAELSLLDYGCLEFVPSLIAASVTFLARFTIRPNVNPWSIALQKCSGYKSKDLKECVLLLHDLQMGRRGGSLSAVRDKYKKHKFKCVSTLSPAPEIPESIF 338 The following BLAST results are available for this feature:
BLAST of CF835925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835925 ID=CF835925; Name=CF835925; organism=Citrus sinensis; type=EST; length=495bpback to top |