CF835985
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RK15_PEA (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE=1 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.356e-73 Identity = 148/217 (68.20%), Postives = 167/217 (76.96%), Query Frame = 3 Query: 9 STPFKGNVKTLMPKPPSSLCVPLKVQQRNKPPQLTVLNQXXXXXXXXTVGSGPVTNVRFRLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGR 659 ++PFKGNVKTL+ KP LC LK+Q+ +++V+N+ + G NVRFRL+NLGPQPGS IAAGQG SCGFGMRGQKSRSGPG+ +GFEGGQMPLYRR+PKLRGIAGGMHAGLPKYV VNL DIE AGF +G+EVSLETLK K +INPS RERKLPLKIL DGELSKKL KA AFSTSAKEKLE AGC+L VLPGR Sbjct: 16 ASPFKGNVKTLVAKP--CLCPCLKIQRTKL--RVSVVNKAASAYNVKSSGE----NVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGR 224
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RK15_ARATH (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2) HSP 1 Score: 268.47 bits (685), Expect = 2.205e-71 Identity = 145/222 (65.32%), Postives = 159/222 (71.62%), Query Frame = 3 Query: 9 STPFKGNVKTLMPKPPSSLCVPLKVQQRNKPPQ-----LTVLNQXXXXXXXXTVGSGPVTNVRFRLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGR 659 ST FKGNV L P L + L + + Q L V++Q S V RFRL+NLGPQPGS I+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGF EGDEVSLETLK KGLINPS RERKLPLKILG GELS KL FKARAFST AKEKLEA+GCTLTVLPGR Sbjct: 24 STSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTA------ATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLPGR 239
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_SYNP6 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplO PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.467e-30 Identity = 78/158 (49.37%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+NL PQPG+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L Y VN+ + AG G EV+LE+L G++ + PLKILGDGELS L+ A AF+ +A++K+EAAG ++ ++ Sbjct: 2 KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGPLKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_SYNE7 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) GN=rplO PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.467e-30 Identity = 78/158 (49.37%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 +L+NL PQPG+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L Y VN+ + AG G EV+LE+L G++ + PLKILGDGELS L+ A AF+ +A++K+EAAG ++ ++ Sbjct: 2 KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGPLKILGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_CYAP7 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 7424) GN=rplO PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.938e-28 Identity = 75/153 (49.02%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 189 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 647 L+ L PQ G+ I+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+ +Y +N+ + A EV+LETL + GLI + PLKILG+GEL+ L KA AF+ A+EK+EAAG + V Sbjct: 3 LHELAPQKGATKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKPGFEGGQMPLYRRIPKLKHFP---LVNRRQYTIINVGQL--ASLDPNSEVTLETLMDAGLITTN----DGPLKILGNGELTIPLTIKAAAFTKGAQEKIEAAGGSCVV 146
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_SYNJA (50S ribosomal protein L15 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplO PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.717e-28 Identity = 72/149 (48.32%), Postives = 92/149 (61.74%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 632 RL ++ PQPGS IAAGQG SCG GMRGQK+R G G R GFEGGQ PLYRR+PKL+ + P+Y +NL+ + A G EVSLE+L + G++ + PLKILGDGE+ L +A A + SA+ K+EAAG Sbjct: 2 RLEDIRPQPGSTRRRRRLGRGIAAGQGASCGKGMRGQKARKGGGPRPGFEGGQTPLYRRLPKLKHFP--RYVRRPQYTLINLRAL--AKLPAGSEVSLESLMDLGIVTTN----DGPLKILGDGEVGVPLTIRAAAITPSARAKVEAAG 142
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_CYAP8 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 8801) GN=rplO PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.717e-28 Identity = 77/158 (48.73%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PK-YVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 R++ + P+ GS I+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+ H L PK Y +N+ +E+ EV+LE+L +G+I + PLK+LGDG L+K L KA AFS SA+EK+ A G + VL Sbjct: 2 RIHEVTPKEGSTKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRIPKLK------HFPLVNPKHYTIINVGKLES--LEPNTEVTLESLMEQGIITTN----DGPLKVLGDGTLTKALTVKAAAFSKSAQEKIAATGGSWEVL 147
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_ANASP (50S ribosomal protein L15 OS=Anabaena sp. (strain PCC 7120) GN=rplO PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.717e-28 Identity = 74/155 (47.74%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 RLN++ PQ GS I+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G Y +N++ + A EV+LE+L+ G++ + K PLKILG+G+L LN KA AF+ A+ K+EAAG + VL Sbjct: 2 RLNDVKPQKGSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRAAGILTAA----KGPLKILGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_SYNS3 (50S ribosomal protein L15 OS=Synechococcus sp. (strain CC9311) GN=rplO PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.146e-27 Identity = 74/156 (47.44%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE-GDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 650 RL +L P G+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L + ++ A ++ G V+L++L G++ K PLKILG+GEL KL +A AF+ SA+ K+EAAG T VL Sbjct: 4 RLESLKPNKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFTLVNPKSFTVLNVSALNEIKAGSTVNLDSLVKDGIVT----SPKSPLKILGNGELKAKLTVQAAAFTASARAKIEAAGGTCEVL 149
BLAST of CF835985 vs. ExPASy Swiss-Prot
Match: RL15_MICAN (50S ribosomal protein L15 OS=Microcystis aeruginosa (strain NIES-843) GN=rplO PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.496e-27 Identity = 71/148 (47.97%), Postives = 89/148 (60.14%), Query Frame = 3 Query: 186 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKNKGLINPS*RERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAA 629 +L+ + PQPGS ++AGQG SCG GMRGQKSRSG G R GFEGGQMPLYRR+PKL+ +Y VNL+ + A EV+LE+L ++ PLK+LGDGE++ L KA AFS SAKEK+ AA Sbjct: 2 KLHEIAPQPGSTKRRRRVGRGVSAGQGASCGLGMRGQKSRSGTGTRPGFEGGQMPLYRRVPKLKHFP---LVNPRQYTIVNLRKL--ASLPANTEVTLESLLKAKILT----SNDGPLKVLGDGEITVPLKVKAAAFSNSAKEKITAA 140 The following BLAST results are available for this feature:
BLAST of CF835985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835985 ID=CF835985; Name=CF835985; organism=Citrus sinensis; type=EST; length=661bpback to top |