CF836032

Overview
NameCF836032
Unique NameCF836032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.032e-94
Identity = 164/233 (70.39%), Postives = 186/233 (79.83%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQS-NRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWY-DEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMPCL 695
            Q+ W+ GLISD TYK LN+ CD+ESFVH S  CDK+LD+A  E GNID YSIFTP+C +S + S N+++KR+  VG   E+YDPCTEKHS+VYFN  EVQKALHV P +  +KWETCS V+N NW D  R+VL IY ELI  GLRIWMFSGDTDAVIPVTSTRYSIDAL LPTV PW AWY D+G+VGGWTQ Y GL FVTVRGAGHEVPLHRPK ALTLIKSFL+ R MP L
Sbjct:  197 QYMWTTGLISDQTYKLLNIFCDFESFVHTSPQCDKILDIASTEAGNIDSYSIFTPTCHSSFASSRNKVVKRLRSVGKMGEQYDPCTEKHSIVYFNLHEVQKALHVNPVIGKSKWETCSEVINTNWKDCERSVLHIYHELIQYGLRIWMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVGGWTQGYKGLNFVTVRGAGHEVPLHRPKQALTLIKSFLAGRPMPVL 429          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 7.163e-88
Identity = 147/224 (65.62%), Postives = 180/224 (80.36%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 674
            Q+ WS G ISD TY  L L C +ESF+H S  C+K+L++AD E+GNIDQYS+FTP+C A+ SQSN LLK+  +    SE+YDPCTEKH+ VYFN PEVQKALHV P +AP+KW+TCS VV+ +W DSP +VL+IY ELI +GLRIW+FSGD DAV+PVTSTRYSIDALNL  +  +  WY +GQVGGW+Q+Y+GL FVTVRGAGHEVPLHRPK AL L K+F+S
Sbjct:  234 QYIWSLGFISDQTYSLLQLQCGFESFIHSSKQCNKILEIADKEIGNIDQYSVFTPACVANASQSNMLLKKRPMTSRVSEQYDPCTEKHTTVYFNLPEVQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVTSTRYSIDALNLRPLSAYGPWYLDGQVGGWSQQYAGLNFVTVRGAGHEVPLHRPKQALALFKAFIS 457          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.571e-71
Identity = 126/236 (53.39%), Postives = 168/236 (71.19%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSC---TASVSQSNRLLKRMHVVG-HP--SEKYDPCTEKHSVVYFNQPEVQKALHV-IPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            +FWW+ G++SDDTY++L   C ++SF+HPS +CD   DVA  E GNID YS++TP C   ++S S S+ L ++    G +P  +  YDPCTE++S  Y+N+ +VQ ALH  +       W TCS  +N +W D+PR++L IYRELI +GLRIW+FSGDTDAV+P+T+TRYSI AL LPT   W  WYD+ +VGGW+Q Y GLT V+VRGAGHEVPLHRP+ AL L + FL  + MP
Sbjct:  202 EFWWNHGIVSDDTYRRLKEACLHDSFIHPSPACDAATDVATAEQGNIDMYSLYTPVCNITSSSSSSSSSLSQQRRSRGRYPWLTGSYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQYFLQGKPMP 437          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 3.023e-70
Identity = 126/234 (53.85%), Postives = 163/234 (69.66%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVG-HP--SEKYDPCTEKHSVVYFNQPEVQKALHV-IPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQ-VGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            +FWW+ G++SDDTY++L   C ++SF+HPS +CD   DVA  E GNID YS++TP C  S S S+  L R    G +P  +  YDPCTE++S  Y+N+ +VQ ALH  +       W  CS  +N +W D+PR++L IYRELI +GLRIW+FSGDTDAV+P+T+TRYSI AL L T   W  WYD+ Q VGGW+Q Y GLT V+VRGAGHEVPLHRP+ AL L + FL  + MP
Sbjct:  234 EFWWNHGIVSDDTYRRLKDACLHDSFIHPSPACDAATDVATAEQGNIDMYSLYTPVCNISSSSSSSSLSRRRTRGRYPWLTGSYDPCTERYSTAYYNRRDVQTALHANVTGAMNYTWTNCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLATTTSWYPWYDDLQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALILFQQFLQGKPMP 467          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.157e-70
Identity = 123/229 (53.71%), Postives = 161/229 (70.31%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            ++WW+ GLISDDTY++L L C+++S  H S +C+K+ +VA+ E G ID YSI+TP+C  +     RL+K           YDPCTE++S  Y+N PEVQKA        P  W  CS V++++W DSPR++L IYRELI +G+RIW+FSGD D+V+P+T+TRYSIDAL LPTV  W  WYDE +V GW Q Y GLT VT+RGAGHEVPLHRP+ AL L + FL  + MP
Sbjct:   89 EYWWTHGLISDDTYQKLQLACEFDSAEHESEACNKINNVAEAEEGLIDAYSIYTPTCKKTSLHRRRLIKGRRP--WLPRGYDPCTEQYSTKYYNLPEVQKAFRANVTGIPYSWTACSDVLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVAGWCQVYKGLTLVTIRGAGHEVPLHRPQQALKLFEHFLQDKPMP 315          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.086e-67
Identity = 125/231 (54.11%), Postives = 156/231 (67.53%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHP--SEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            ++WW+ GLISD TY QL   C   S  HPS  C   L  A+ E GNID YSIFT  C ++V+     LKR     +P  S  YDPCTE++S VYFN+ +VQKALH         W+ CS +V + W DSP ++L IY+ELI +GL+IW+FSGDTDAV+P+T+TRYS+DAL L T+  W  WYD G+VGGW+Q Y GLT VTV GAGHEVPLHRP+ A  L +SFL  + MP
Sbjct:  232 EYWWNHGLISDSTYHQLKTACYSVSSQHPSMQCMVALRNAELEQGNIDPYSIFTKPCNSTVA-----LKRFLKGRYPWMSRAYDPCTERYSNVYFNRLDVQKALHANVTRLSYPWKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVGGWSQVYKGLTLVTVAGAGHEVPLHRPRQAFILFRSFLESKPMP 457          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.337e-67
Identity = 121/231 (52.38%), Postives = 154/231 (66.67%), Query Frame = 3
Query:    3 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPS--EKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            ++WW+ GLISD TY  L + C++ S  HPSS C K ++ AD E GNID YSI+T +C     ++  L  R   V HP     YDPCTEK+S +YFN PEVQKA+H         W+ CS +V   W DSP ++L IY+ELI +GLRIW+FSGDTD+V+P+T TRYSI AL L  +  W  W D+GQVGGW+Q Y GLT VT+ GAGHEVPL RP+ A  L +SFL  + +P
Sbjct:  224 EYWWAHGLISDLTYHNLRITCEFGSSEHPSSKCTKAMEAADLEQGNIDPYSIYTVTCK---KEAAALRSRFSRVRHPWMWRAYDPCTEKYSGMYFNSPEVQKAMHANITGLAYPWKGCSDIVGEKWADSPLSMLPIYKELIAAGLRIWVFSGDTDSVVPITGTRYSIRALKLQPLSKWYPWNDDGQVGGWSQVYKGLTLVTIHGAGHEVPLFRPRRAFLLFQSFLDNKPLP 451          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 3.958e-62
Identity = 118/240 (49.17%), Postives = 151/240 (62.92%), Query Frame = 3
Query:    6 FWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVA-DNELGNIDQYSIFTPSCTASVS-----------QSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            +WWS  +ISD TY QL   CD+ S    S  C+ +   A + E GNIDQY+I+ P C  S             +S RL    H V      YDPCTE+++ +Y+N+P+VQKALH      P KW  CS V+N NW D+  TVL IYRE+I  G+R+W+FSGD D+V+PVT+TRYS+  L+L T  PW  WY + QVGGWT+ Y GLTFVTVRGAGHEVPL +P+ A  L K FL  + +P
Sbjct:  233 YWWSHAMISDRTYHQLISTCDF-SRQKESDECETLYSYAMEQEFGNIDQYNIYAPPCNKSSDGGGSYNGSSGRRSMRLPHLPHSVLRKISGYDPCTERYAEIYYNRPDVQKALHANTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVGGWTEVYEGLTFVTVRGAGHEVPLFKPRAAFELFKYFLRGKPLP 471          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.504e-61
Identity = 117/239 (48.95%), Postives = 154/239 (64.44%), Query Frame = 3
Query:    6 FWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADN-ELGNIDQYSIFTPSCTAS----------VSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            +WW+  +ISD +YK +   C++ +    S  CD  ++ A N E G+IDQYSI+TP+C A+          V   N LL+R  V G     YDPCTE ++  YFN+P+VQ+A+H        KW  CS V+   W DS +T+L IY+EL  SGLRIW+FSGDTD+V+PVT+TR+S+  LNLP    W  WY + QVGGWT+ Y GLTF TVRGAGHEVPL  PK AL L +SFL+ + +P
Sbjct:  230 YWWTHAIISDKSYKSILKYCNF-TVERVSDDCDNAVNYAMNHEFGDIDQYSIYTPTCVAAQQKKNTTGFFVRMKNTLLRRRLVSG-----YDPCTESYAEKYFNRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVGGWTEVYKGLTFATVRGAGHEVPLFEPKRALILFRSFLAGKELP 462          
BLAST of CF836032 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 9.748e-61
Identity = 111/226 (49.12%), Postives = 152/226 (67.26%), Query Frame = 3
Query:   12 WSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLDVADNELGNIDQYSIFTPSCTASVSQSNRLLKRMHVVGHPSEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCSGVVNNNWLDSPRTVLDIYRELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSXRSMP 689
            WS  +ISD TYK +   C + +    S  C+  L  A  E G ++ YSI++PSC    +Q+  L  R+ V  +   +YDPCTE ++ +Y+N+P+VQ+A+H      P KW  C+ VVNNNW DS  ++L IY+EL  +GLRIW+FSGDTDAV+PVT TR ++  LNLP   PW  WY E QVGGWT+ Y GLTF T+RGAGHEVP+ +P+ ALTL++SFL+ + +P
Sbjct:  230 WSHAMISDKTYKSILKHCSFTAD-KTSDKCNWALYFAYREFGKVNGYSIYSPSCVHQTNQTKFLHGRLLVEEY---EYDPCTESYAEIYYNRPDVQRAMHANLTSIPYKWTLCNMVVNNNWKDSEFSMLPIYKELTAAGLRIWVFSGDTDAVVPVTGTRLALSKLNLPVKTPWYPWYSEKQVGGWTEVYEGLTFATIRGAGHEVPVLQPERALTLLRSFLAGKELP 451          
The following BLAST results are available for this feature:
BLAST of CF836032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
CBP22_HORVU1.032e-9470.39Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP29_ARATH7.163e-8865.63Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP2_WHEAT3.571e-7153.39Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
CBP2_HORVU3.023e-7053.85Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
CBP21_HORVU5.157e-7053.71Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
SCP27_ARATH4.086e-6754.11Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP26_ARATH5.337e-6752.38Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP25_ARATH3.958e-6249.17Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP24_ARATH1.504e-6148.95Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP23_ARATH9.748e-6149.12Putative serine carboxypeptidase-like 23 OS=Arabid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836032 ID=CF836032; Name=CF836032; organism=Citrus sinensis; type=EST; length=741bp
TCCAGTTTTGGTGGTCAGCTGGTTTGATATCTGATGATACGTACAAGCAA
CTAAACCTTCTATGTGATTATGAGTCCTTTGTCCACCCCTCCAGTTCTTG
TGATAAGGTCCTAGATGTTGCTGATAATGAACTTGGAAACATTGACCAAT
ACAGTATTTTCACCCCTTCCTGCACTGCCAGTGTTAGCCAGTCAAATCGG
CTGCTTAAAAGAATGCATGTTGTTGGTCACCCCAGCGAGAAGTATGATCC
TTGCACTGAGAAGCACTCAGTTGTGTACTTCAATCAACCTGAGGTTCAAA
AGGCTCTCCATGTTATTCCAGCAGTTGCACCGGCAAAATGGGAGACTTGC
AGTGGTGTGGTAAATAATAACTGGCTGGATTCTCCTAGGACAGTGCTGGA
CATTTATCGTGAGCTTATACATTCTGGACTTCGTATATGGATGTTCAGTG
GTGATACAGATGCTGTGATCCCAGTTACGTCCACCCGTTACAGCATAGAT
GCTCTTAATCTTCCAACAGTGAAGCCCTGGCGTGCCTGGTATGACGAGGG
GCAGGTGGGAGGATGGACCCAAGAGTATTCTGGACTTACCTTTGTCACCG
TGAGGGGAGCAGGCCACGAAGTCCCATTGCATAGACCCAAACCTGCTCTC
ACACTAATCAAAAGCTTTCTATCANGAAGGTCAATGCCATGCTTGAAACG
AGTCAGCCACAGTGACTCATGAAGCTTGCATTCTCACTTGA
back to top