CF836060

Overview
NameCF836060
Unique NameCF836060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836060 vs. ExPASy Swiss-Prot
Match: FRS3_ARATH (Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.622e-37
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = -3 
Query:  447 YSKTPSAELEVKFQLSKVTLEPMLRSMAYISDQLSTPANRVAVINLKLQDTETISGESEVKFQVSRDTLGAMLRSMAYIREQLSNTAEPQSEPPSKKHRK 746
            Y K PSA+++VKFQLS VTLEPMLRSMAYIS+QLS+PANRVAVINLKLQDTET +GESEVKFQVSRDTLGAMLRSMAYIREQLS   E Q+E  +KK RK
Sbjct:  752 YRKFPSADMDVKFQLSSVTLEPMLRSMAYISEQLSSPANRVAVINLKLQDTETTTGESEVKFQVSRDTLGAMLRSMAYIREQLSIVGELQTESQAKKQRK 851
The following BLAST results are available for this feature:
BLAST of CF836060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FRS3_ARATH2.622e-3781.00Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_02F16_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02F16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836060 ID=CF836060; Name=CF836060; organism=Citrus sinensis; type=EST; length=748bp
TTTTTTTTTTTTTTTTGAAAGCATTCACAGCAAGCAGAATTAAATCGGAT
AATTTGACACTCTCCATTAAGGTCTCAACTATTCCTAAGGTTATCATACA
GCGAGGATTAGAAAAAAAAAAAAAAACCCTTAAACTAGGGCTCTCTCTGA
TGCCTCGTATTTCCGAATCTGATGCATTCATGTACAAATATGGTACAGAA
AAAGCTTACACAAAGATGAAGCAAAGTGAAGAAAAATGCAGAACCTAACT
AAGCTAAAAGAAGGCTAGCCAATACAAGAACTAAACATAGCATCCCAGCG
CCTTAAAGACTGACTGGTGATCAAAAATTCGGTGAAACAGAGCAACATGG
CTCCTTGAGACGTGACCAAATTTTTGGTGAACACTTTCCACCCATAGAGG
CAAGTTAGTTGAACACACCTGGGAACAGAATTCAAATAACGACTTATTTA
CGATGCTTCTTTGATGGAGGTTCTGACTGTGGCTCAGCAGTGTTTGAAAG
CTGCTCCCGGATGTAGGCCATTGATCTTAACATAGCACCTAAGGTATCTC
TGGAGACCTGAAATTTAACCTCTGACTCTCCTGAAATTGTCTCAGTATCT
TGAAGCTTCAAATTGATGACTGCAACCCTGTTAGCTGGCGTTGAAAGCTG
GTCACTTATATATGCCATGGACCTTAACATGGGTTCCAGTGTAACCTTAG
AGAGCTGAAACTTAACCTCCAATTCTGCTGAGGGAGTCTTGCTATAAT
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