CF836062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 7.756e-70 Identity = 129/139 (92.81%), Postives = 135/139 (97.12%), Query Frame = -3 Query: 118 PKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 534 PKKRTFKKFS+RGVDLDALLDM+++ELVKLF ARARRRFQRGLKR+PMALIKK RKAKREAP+GEKPEPV THLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 13 PKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPMALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 2.947e-69 Identity = 127/141 (90.07%), Postives = 133/141 (94.33%), Query Frame = -3 Query: 118 GLPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 540 G+PKKRTFKKF+F+GVDLDALLDMS D+LVKLFS+R RRRF RGL RKPMALIKK RKAKREAP GEKPEPV THLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL EFSISYKPVKHGRPG+GATHSSRFIPLK Sbjct: 12 GVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 5.027e-69 Identity = 127/141 (90.07%), Postives = 133/141 (94.33%), Query Frame = -3 Query: 118 GLPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 540 G+PKKRTFKKF+F+GVDLDALLDMS D+LVKLFS+R RRRF RGL RKPMALIKK RKAKREAP GEKPEPV THLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL EFSISYKPVKHGRPG+GATHSSRFIPLK Sbjct: 12 GVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 6.566e-69 Identity = 128/139 (92.09%), Postives = 131/139 (94.24%), Query Frame = -3 Query: 118 PKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 534 PKKRTF+KFS+RGVDLD LLDM DELVKLF ARARRRFQRGLKRKPMALIKK RKAKR+AP GEKPEPV THLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 15 PKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRKPMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 2.495e-68 Identity = 125/139 (89.93%), Postives = 133/139 (95.68%), Query Frame = -3 Query: 118 PKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 534 PKKRTF+K+S+RGVDLDALLDMS D+LV+LF ARARRRFQRGLKRKPMALIKK RKAK++AP GEKPEPV THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL EFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 16 PKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS153_ARATH (40S ribosomal protein S15-3 OS=Arabidopsis thaliana GN=RPS15C PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 9.811e-65 Identity = 122/141 (86.52%), Postives = 128/141 (90.78%), Query Frame = -3 Query: 118 GLPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 540 G+ KKRTFKKFSFRGVDLDALLDMS D+LVKLF +R RRRF RGL RKPMALIKK RKAK EAP GEKP V THLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGHYL EFSISYKPVKHGRPG+GAT+SSRFIPLK Sbjct: 10 GIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS155_ARATH (40S ribosomal protein S15-5 OS=Arabidopsis thaliana GN=RPS15E PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 4.869e-64 Identity = 122/141 (86.52%), Postives = 128/141 (90.78%), Query Frame = -3 Query: 118 GLPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 540 G+ KKRTFKKFSFRGVDLDALLDMS ++LVK FS+R RRRF RGL RKPMALIKK RKAK EAP GEKP V THLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL EFSISYKPVKHGRPG+GAT+SSRFIPLK Sbjct: 9 GIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLRKAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 149
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS152_ARATH (40S ribosomal protein S15-2 OS=Arabidopsis thaliana GN=RPS15B PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 2.954e-61 Identity = 114/140 (81.43%), Postives = 125/140 (89.29%), Query Frame = -3 Query: 118 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 537 L KKRTFKKFSF+GVDLDALLDM D+LV+LF +R RRR RGL RKPMALIKK RKAK +AP GEKPE V THLRNM+I+PEMIGSIIGVYNGKTFNQ+EIKPEMIGHYL EFSI+YKPV+HG+PG GATHSSRFIPLK Sbjct: 13 LAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_PODAN (40S ribosomal protein S15 OS=Podospora anserina GN=RPS15 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 8.045e-59 Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = -3 Query: 118 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 537 L KKRTF+KFS+RGVDLDALLD+++DEL + ARARR+ RGLKR+PM LIKK RKAK+EA EKP+ V THLR+MI+VPEMIGS++G+Y+GK FNQVEIKPEM+GHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 13 LKKKRTFRKFSYRGVDLDALLDLTSDELRDVVHARARRKINRGLKRRPMGLIKKLRKAKQEAKPNEKPDLVKTHLRDMIVVPEMIGSVVGIYSGKEFNQVEIKPEMVGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 152
BLAST of CF836062 vs. ExPASy Swiss-Prot
Match: RS15_RAT (40S ribosomal protein S15 OS=Rattus norvegicus GN=Rps15 PE=1 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 1.792e-58 Identity = 107/138 (77.54%), Postives = 126/138 (91.30%), Query Frame = -3 Query: 118 KKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKFRKAKREAPNGEKPEPVGTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLGEFSISYKPVKHGRPGIGATHSSRFIPLK 531 KKRTF+KF++RGVDLD LLDMS ++L++L+SAR RRR RGL+RK +L+K+ RKAK+EAP EKPE V THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGHYLGEFSI+YKPVKHGRPGIGATHSSRFIPLK Sbjct: 8 KKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145 The following BLAST results are available for this feature:
BLAST of CF836062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836062 ID=CF836062; Name=CF836062; organism=Citrus sinensis; type=EST; length=599bpback to top |