CF836073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 1.126e-85 Identity = 167/202 (82.67%), Postives = 182/202 (90.10%), Query Frame = 1 Query: 136 MAMAALRREGRRFAT-PLISPRPIAAIRSPFLS--EEDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKNVEIDALRII 732 MAMAALRREGRR A P SP P+ A+RS +S EE GVRSISTQ+VRNRMKSVKNIQKITKAMKMVAASKLRAIQ +AENSRGLWQPFTALLGDTP+VD KKNVI+TISSDKGLCGGINST+VK S+++HKLNSGP+KENKYVILGEKAKA LVRDSKKDIELIITELQKNPL+YTQVSV+ADDILKNVE DALRI+ Sbjct: 1 MAMAALRREGRRLAAAPFTSPTPLNALRSSLVSPSEEIGLSGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITISSDKGLCGGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIV 202
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 5.986e-79 Identity = 152/200 (76.00%), Postives = 176/200 (88.00%), Query Frame = 1 Query: 136 MAMAALRREGRRFATPLISPRPIAAIRSPFLSE-EDAPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKNVEIDALRII 732 MAMA RREGRR P I+ RPIAAIRSP S+ E+ LGVRSISTQ+VRNRMKSVKNIQKITKAMKMVAASKLRA+Q +AENSRGLWQPFTALLGD P++D KK+V+VT+SSDKGLCGGINST VK+S++L+KLN+GP+KE ++VI+GEKAKAI+ RDSK DI L +TEL KNPL+Y QVSVLADDILKNVE DALRI+ Sbjct: 1 MAMAVFRREGRRLL-PSIAARPIAAIRSPLSSDQEEGLLGVRSISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLGDNPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIV 199
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_BOVIN (ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15 Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 253 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALL--GDTPTV-DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKN 705 VR+++T + + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D T D KK++I+ +SSD+GLCG I+S+ K KS + KE K + +G+K ++IL R + E+ + P + SV+A ++L + Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKADIKTPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNS 176
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_MOUSE (ATP synthase subunit gamma, mitochondrial OS=Mus musculus GN=Atp5c1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.964e-15 Identity = 55/159 (34.59%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 253 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKN 705 VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ +V S L++ + D KK++I+ +SSD+GLCG I+S+ K K+ + KE V +GEK K IL R + ++ + P + SV+A ++L + Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKADIKAPE----DKKKHLIIGVSSDRGLCGAIHSSVAKQMKNEVAALTAAGKEVMIVGVGEKIKGILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNS 176
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_RAT (ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus GN=Atp5c1 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14 Identity = 51/146 (34.93%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 277 VRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKN 705 + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D KK++I+ +SSD+GLCG I+S+ K K+ + KE V +GEK K+IL R + ++ + P + SV+A ++L + Sbjct: 6 ITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNS 151
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_MACFA (ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis GN=ATP5C1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14 Identity = 53/159 (33.33%), Postives = 89/159 (55.97%), Query Frame = 1 Query: 253 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASK-------LRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKN 705 VR+++T + + R+KS+KNIQKITK+MKMVAA+K L+ ++ S L++ + + D KK++++ +SSD+GLCG I+S+ K KS + KE V +G+K + IL R + E+ + P + SV+A ++L + Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKVPE----DKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNS 176
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_HUMAN (ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14 Identity = 53/155 (34.19%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 253 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKN 705 VR+++T + + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D KK++++ +SSD+GLCG I+S+ K KS + KE V +G+K + IL R + E+ + P + SV+A ++L + Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNS 176
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_PONAB (ATP synthase subunit gamma, mitochondrial OS=Pongo abelii GN=ATP5C1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14 Identity = 53/155 (34.19%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 253 VRSIST-QIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLHYTQVSVLADDILKN 705 VR+++T + + R+KS+KNIQKITK+MKMVAA+K + + + +R AL D KK++++ +SSD+GLCG I+S+ K KS + KE V +G+K + IL R + E+ + P + SV+A ++L + Sbjct: 22 VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGVGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNS 176
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_ROSDO (ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpG PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14 Identity = 51/167 (30.54%), Postives = 92/167 (55.09%), Query Frame = 1 Query: 265 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRD--SKKDIELIITELQKNPLHYTQVSVLADDILKNVEI 714 S + ++NR++SVK+ +KITKAM+MVAA+KLR Q AE SR + F A++ + T K +++ ++S++GLCGG N+ K++++ + G K+ K + +G+K + L RD S + +TE+++ + Y +A D+L ++ Sbjct: 3 SLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQEAAEQSRPYTERFNAVMAGLAASVGGSDSAPKLLSGTGSDKVQLLIVMTSERGLCGGFNTNIAKLARAHAQKLQGEGKDVKILTVGKKGRDQLKRDLGSLFIGHVDLTEIKR--VSYVDAQGIAKDVLNRFDV 167
BLAST of CF836073 vs. ExPASy Swiss-Prot
Match: ATPG_ERYLH (ATP synthase gamma chain OS=Erythrobacter litoralis (strain HTCC2594) GN=atpG PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.805e-14 Identity = 54/168 (32.14%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 265 STQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDA------------------KKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI-ELIITELQKNPLHYTQVSVLADDILKNVE 711 S + +++R+ SVK+ QKITKA +MVAA+KLR Q AE +R P+ L D A +K+++V +++DKGLCGG+NS VK +K+ K K+ ++ ++G+K +A + RD +K I + T K P + + +A++++ E Sbjct: 3 SLKELKDRIGSVKSTQKITKAKQMVAAAKLRRAQANAEAAR----PYAERLADVMASLAGKVSGDSAPRLLAGSGNDQKHLLVVVNTDKGLCGGLNSNIVKEAKAQAKKLIAAGKDVQFYLVGKKGRAPIKRDYEKQIAKHFDTSTVKQP-GFEEADAIANELIDMFE 165 The following BLAST results are available for this feature:
BLAST of CF836073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836073 ID=CF836073; Name=CF836073; organism=Citrus sinensis; type=EST; length=734bpback to top |