CF836218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.374e-86 Identity = 158/207 (76.33%), Postives = 177/207 (85.51%), Query Frame = 3 Query: 60 MSSQIVXXXXXXXXXXXXXXKNSRFYSEGRAVSAAAAVTFSGKLPYLVSSFGRA-GSSTASRSWLSGAIAIPAAAYTLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 677 MSSQI KN+RF+SEGRA+ AAAAV+ SGK+P S+F R+ GS AS+SW++G +A+PAAAY +Q+QEV AAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLV IK++VPSK+FAQKHYHDLKERPFFNGLC+FLSSGPVIAMVWEG+GVI YGRKLIGATDPQKSEPGTIRGDLAV VGRNIIHGSDGP Sbjct: 1 MSSQICRSASKAAKSLLSSAKNARFFSEGRAIGAAAAVSASGKIPLYASNFARSSGSGVASKSWITGLLALPAAAYMIQDQEVLAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGP 207
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2) HSP 1 Score: 309.301 bits (791), Expect = 1.191e-83 Identity = 152/206 (73.79%), Postives = 172/206 (83.50%), Query Frame = 3 Query: 60 MSSQIVXXXXXXXXXXXXXXKNSRFYSEGRAVSAAAAVTFSGKLPYLVSSFGRAGSSTASRSWLSGAIAIPAAAYTLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 677 MSSQI KN+RF+SEGRA+ AA+ V +GK+P S+FG++GS S SW++G +A+PAAA+ LQ+QE AAEMERTFIAIKPDGVQRGLISEII+RFERKG+KLV IK++VPSK FAQKHYHDLKERPFFNGLC FLSSGPV+AMVWEGEGVI YGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP Sbjct: 1 MSSQICRSASRAARSLLSSAKNARFFSEGRAIGAASVVHATGKVPQYASNFGKSGSGFVSNSWITGLLALPAAAFMLQDQEALAAEMERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNGLCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 206
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 8.833e-79 Identity = 146/185 (78.92%), Postives = 161/185 (87.03%), Query Frame = 3 Query: 123 NSRFYSEGRAVSAAAAVTFSGKLPYLVSSFGRAGSSTASRSWLSGAIAIPAAAYTLQEQEVHAAEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 677 +SRF EGR V+A AAV+ K PYL S G + AS +W+S A+AIPAAAY LQ+QE AAE ERTFIAIKPDGVQRGLISEI++RFERKGFKLVAIK+V+PSK+FAQKHYHDL ERPFFNGLC+FLSSGPV+AMVWEGEGVI YGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP Sbjct: 24 SSRFLPEGRTVAATAAVSLRVKAPYLASF----GGANASGTWMSTALAIPAAAYLLQDQEACAAEFERTFIAIKPDGVQRGLISEIVARFERKGFKLVAIKVVIPSKDFAQKHYHDLSERPFFNGLCDFLSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 204
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.982e-54 Identity = 102/122 (83.61%), Postives = 112/122 (91.80%), Query Frame = 3 Query: 312 AEMERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 677 AE ERTFIAIKPDGVQRGLISEI++RFERKGF LVAIK+V+PS+ FAQKHY DLK++PF+ GL + SSGPV+AMVWEGEGVI YGRKLIGATDPQKSEPGTIRGDLAVV GRNIIHGSDGP Sbjct: 1 AEFERTFIAIKPDGVQRGLISEIVARFERKGFSLVAIKVVIPSRPFAQKHYADLKDKPFYVGLVAYWSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVNGRNIIHGSDGP 122
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.548e-46 Identity = 87/119 (73.11%), Postives = 103/119 (86.55%), Query Frame = 3 Query: 318 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 674 +ERTF+AIKPDGVQRGLI+EI+ RFE KGFKLV +K + PSKE A+KHY K+RPFF+GL +F++SGPVIAMVWEGEGVI RKLIGAT P ++EPGTIRGDLAV +GRN+IHGSDG Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDG 121
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.548e-46 Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 3 Query: 318 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 677 +ERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K ++PSKE A+KHY KERPFF GL F++SGPV+AMVWEG+GVI RKLIGAT P ++EPGTIRGDL + +GRN+IHGSDGP Sbjct: 3 VERTFLAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGP 122
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.857e-46 Identity = 86/119 (72.27%), Postives = 103/119 (86.55%), Query Frame = 3 Query: 318 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 674 +ERTF+AIKPDGVQRGLI+EI+ RFE KGFKLV +K + PSKE A+KHY K+RPFF+GL +F++SGPV+AMVWEGEGVI RKLIGAT P ++EPGTIRGDLAV +GRN+IHGSDG Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDG 121
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.868e-45 Identity = 86/120 (71.67%), Postives = 101/120 (84.17%), Query Frame = 3 Query: 318 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 677 MERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K V PS++ A +HY +ERPFF GL +F++SGPVIAMVWEG+GVI RKLIGAT P +EPGTIRGDLAV +GRN+IHGSDGP Sbjct: 3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGP 122
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.892e-45 Identity = 83/119 (69.75%), Postives = 102/119 (85.71%), Query Frame = 3 Query: 321 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 677 ER+FIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+E A++HY KERPFF GL +F++SGPV+AMVWEG+GVIT RK+IGAT P ++EPGTIRGDLA+ +GRN+IHGSD P Sbjct: 4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAP 122
BLAST of CF836218 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.892e-45 Identity = 85/119 (71.43%), Postives = 101/119 (84.87%), Query Frame = 3 Query: 321 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 677 ERTFIAIKPDGVQRGLI EI+ RFERKGFKLV +K + PS+E A++HY KERPFF GL +F++SGPV+AMVWEG+GVI RKLIGAT P ++EPGTIRGDLA+ +GRN+IHGSD P Sbjct: 4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAP 122 The following BLAST results are available for this feature:
BLAST of CF836218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836218 ID=CF836218; Name=CF836218; organism=Citrus sinensis; type=EST; length=677bpback to top |