CF836242

Overview
NameCF836242
Unique NameCF836242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836242 vs. ExPASy Swiss-Prot
Match: WUN1_SOLTU (Wound-induced protein 1 OS=Solanum tuberosum GN=WUN1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.477e-29
Identity = 67/107 (62.62%), Postives = 75/107 (70.09%), Query Frame = 2 
Query:  326 FVFVPLSITSFGPIVLAEGCDHSRQISWVHAWTVADGIITQVREYFNTSLTVTRFGKDLSGQSQRKKSPPSDFPSTAEINPVHCPSVWESSVSNRDGKSVPGLVLAL 646
            F F+  +I  FG +VL EGCD +R I+WVHAWTV DG+ITQVREYFNTSLTVTRFGK             SD  S   I  +HCPSVWESS+ NR GKSVPGLVLAL
Sbjct:   15 FQFLHKTIDVFGSVVLVEGCDPTRSITWVHAWTVTDGVITQVREYFNTSLTVTRFGK-------------SDISS---ITTLHCPSVWESSLPNRVGKSVPGLVLAL 105
The following BLAST results are available for this feature:
BLAST of CF836242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WUN1_SOLTU7.477e-2962.62Wound-induced protein 1 OS=Solanum tuberosum GN=WU... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_02K09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836242 ID=CF836242; Name=CF836242; organism=Citrus sinensis; type=EST; length=738bp
CGGTTTATCTCTGGTAACCCTTATCCAGAATCACAAAACAACCTCATTTC
ATCTTCAGTTTCTCTGTTTTTGTTGTTGCCATTTTTTAAGGCTATTCCGT
CAAGAACTGGCTAACTCTCAGCAGAAAAATCCGGAAGATTCCGAAAACAA
GAACCAGCGCGTGGTTCTTGCTCTGTATGATGCCTTAAAATCTCGAGACG
TTGAAACGGTACACAAGATCCTTGCCCCGGACCTAGAGTGGTGGTTCCAT
GGCCCGCCGACCCACCAGTTTATGATGCACCTTCTCACCGGCAGCACCAC
CGCATCGTCAGCATCGCAAAGCTCCTTCGTATTCGTTCCTCTCTCGATCA
CATCGTTCGGGCCCATTGTCCTCGCCGAGGGCTGTGATCACAGCCGTCAA
ATCAGCTGGGTCCACGCCTGGACGGTCGCTGATGGGATAATTACTCAAGT
CAGAGAATACTTCAACACTTCGCTTACCGTCACCCGCTTCGGTAAAGACT
TGTCTGGCCAAAGTCAGAGGAAGAAATCACCACCCTCTGATTTCCCATCA
ACAGCGGAGATTAATCCGGTGCATTGCCCCTCCGTTTGGGAGAGCAGCGT
CTCCAACCGGGACGGTAAATCTGTCCCGGGTTTGGTTCTCGCTCTCTAAG
CAAACCAAAAAAGGGACCGAGATTGATCCTGTGCAGCCGCGTGTATTATA
ATATTATACCATATTAACATATAAATAAAGGCTGCACG
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