CF836244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 9.545e-37 Identity = 72/118 (61.02%), Postives = 89/118 (75.42%), Query Frame = 2 Query: 17 ISQMAALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 ++ A KL + LCM V+ A AITCGQV+ SLAPCIG++RSGG +P CCNG+R++N ARTT DRQTACNCLK A SI +N NNAAGLPG CGV++PYKISTST+C+ V+ Sbjct: 1 MASSAVTKLALVVALCMAVS---VAHAITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.247e-36 Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = 2 Query: 29 AALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 A KL + LCM+V+ P+ AQAITCGQVS +LAPCI ++R GG +P CCNG+R++N ARTTPDRQ ACNCLKQ + S+P +N NNAA LPG CGV+IPY+IS ST+C+ V+ Sbjct: 5 AMTKLALVVALCMVVSVPI-AQAITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.628e-36 Identity = 68/114 (59.65%), Postives = 89/114 (78.07%), Query Frame = 2 Query: 29 AALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 A KL + LCM+V+ P+ AQA+TCGQVS +LAPCI ++R GG +P CCNG+R++N A+TT DRQTACNCLKQ + S+P +N NNAA LPG CGV++PYKIS ST+C+ V+ Sbjct: 5 AMTKLALVVALCMVVSVPI-AQALTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.524e-34 Identity = 69/113 (61.06%), Postives = 85/113 (75.22%), Query Frame = 2 Query: 32 ALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 A+ ++ A V CM+V P + +A++CGQVS SLAPCI +L GG +P CC+GV+SLN+AA+TTPDRQ AC CLK A SI +N NAA PG CGVSIPYKIS STDCSKV+ Sbjct: 5 AMMVLCAGVTCMVVGAPYT-EALSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.563e-34 Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 2 Query: 98 ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 ITCGQVS SLAPCI +LR+GG +P CCNGVRSLN AA+TT DRQ ACNCLK A SI LNLN AAGLPG CGVS+PYKIS STDC V+ Sbjct: 1 ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.290e-33 Identity = 66/117 (56.41%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 17 ISQMAALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 367 ++ A +KL A++LC++V P + ITCG VS LAPCIG+L+ GGP+ CC G+++LNAAA TTPDR+TACNCLK AA +I +N AAGLPG CGV IPY IS ST+C+ V Sbjct: 1 MASSAVIKLACAVLLCIVVAAPYAEAGITCGMVSSKLAPCIGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.685e-33 Identity = 70/117 (59.83%), Postives = 86/117 (73.50%), Query Frame = 2 Query: 26 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 MA L ++ LVL CM+V GP+++ A ++CG VSG +APCIG+L GP+P CC GV +LN ARTTPDRQ AC CL AA S P+LN AAGLP ACGV+IPYKIS ST+C+ VR Sbjct: 1 MAGLMKLACLVLACMIVAGPITSNAALSCGTVSGYVAPCIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.200e-33 Identity = 71/117 (60.68%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 26 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 MA L +S LVL CM+V GP++ A ++CG VSG+LA CIG+L GP+P CC GV +LN ARTTPDRQ AC CL AA S P+LN AAGLP ACGV+IPYKIS ST+C+ VR Sbjct: 1 MAGLVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPLPRGCCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.874e-33 Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 2 Query: 17 ISQMAALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 ++ A +KL + LCM V+ A AITC QVS +LAPCI ++RSGG +P CCNG++++N A+TTPDRQ ACNCLK A S+ +N NA LPG CGV++PYKISTST+C+ V+ Sbjct: 1 MASSAVIKLALVVALCMAVS---VAHAITCSQVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNPGNAESLPGKCGVNVPYKISTSTNCATVK 115
BLAST of CF836244 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.874e-33 Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 2 Query: 26 MAALKLVSALVL-CMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 370 MA L +S LVL CM+V GP++ A ++CG VSG+LA CIG+L GP+P CC+GV SLN ARTTPDRQ AC CL AA ++P++N+ AAGLP ACGV+IPYKIS +T+C+ V+ Sbjct: 1 MAGLVKLSCLVLACMIVAGPIATNAALSCGTVSGNLAACIGYLTQNGPVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117 The following BLAST results are available for this feature:
BLAST of CF836244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836244 ID=CF836244; Name=CF836244; organism=Citrus sinensis; type=EST; length=555bpback to top |