CF836252

Overview
NameCF836252
Unique NameCF836252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF836252 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = -1 
Query:  577 LRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVA 750
            LR+ YGL++ A E ++++EAYK LRDRAPYPP+ V+  L G FAFI++D   STLF+A
Sbjct:   91 LRKHYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLA 148
The following BLAST results are available for this feature:
BLAST of CF836252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC1.606e-1356.90Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_02K15_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836252 ID=CF836252; Name=CF836252; organism=Citrus sinensis; type=EST; length=759bp
GAACACTGGGACAAGACTTTATTACCTTAAAACATAACTGTACATTGGAC
CACACTGGATAAACCGTTAATTTGAAAGCAAACACCTAAGAAACTTGAAA
GGAGCTATAGCTACAAAGAAAGCTGGGTGCTACATTTCTCACAAGCATAC
ACTATTTCCATTCCAGTTGATATTTTGCTACACTCATTTTGTTATTCACA
TGGACCCTCTTGCAGCTTGCATCCCCACAAACTTTTTTTCCCCCAAACCG
CCGATTTTTAACTGTTGGCTAATATCTCAAGTCGAGAAGAAATATCTTCT
AGCCTTCTACTCTGTGGCTGCAAGAACTGCTGGCCCTTCCACCTTAAATG
TAGCACCCCAGATCTCTTCTTCCGCAGCAGGAACTGCAGTGATCTTGTTC
TTTGGATTCTCAAAGCTTCTCAGTCCTCCAACTGCTGTTGAGAAGAAACA
ACCTTGAGGGAAAGAAGCAAGTGACTTGCCGCAAGCACCTTTGAGCAAGT
CAGCATCATCAGCAAAGGCAACATGTCCATCAGCAGTGATTCCCCAATAA
AGAGGAACCTTACCAAATTGGTCAGAAGCCACAAACAAGGTGGAGGTGGA
CTTGTCGTAGACAATGAAGGCAAAGTACCCACTAAGGTGGCCAACGACAT
GGTTCGGTGGGTAAGGGGCCCGATCACGCAGAGCCTTGTATGCCTCAATC
ACCAAGATCACTTCATTTGCCGACTTAGCTAGTCCATATTGCTGCCTCAG
GCTTCCCAA
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