CF836268

Overview
NameCF836268
Unique NameCF836268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.154e-39
Identity = 77/140 (55.00%), Postives = 105/140 (75.00%), Query Frame = -2
Query:  293 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYLLEFGPKISLPEGNYRDEL 712
            +RIE+VI  QA+V  C+ATVDF+ +EKPFFPPT+N+  LH++F+ V+GDML  +    M P+MGSEDFSFYQ+ +PG+F F+GM+N+    +   HSPYF +NE+ LPYGA+LHAS+A RYLLE     +L + N +DEL
Sbjct:  302 KRIEQVITRQASVNMCNATVDFIEEEKPFFPPTVNDKALHQFFKNVSGDMLGIENYVEMQPLMGSEDFSFYQQAIPGHFSFVGMQNKARSPMASPHSPYFEVNEELLPYGASLHASMATRYLLELKAS-TLNKSNKKDEL 440          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 79/128 (61.72%), Postives = 98/128 (76.56%), Query Frame = -2
Query:  332 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPG-YFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYLLEFGP 712
            QRIEEVI+ QA+VQRC+A VDFL K++PFFPPTIN+  LH +F  VA +M+  + V+   P+MG+EDF+FY + +P  Y++FLGM NET G     HSPYFT+NEDALPYGAAL ASLA RYLLE  P
Sbjct:  303 QRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHSPYFTINEDALPYGAALQASLAARYLLEHQP 430          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 79/128 (61.72%), Postives = 98/128 (76.56%), Query Frame = -2
Query:  332 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPG-YFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYLLEFGP 712
            QRIEEVI+ QA+VQRC+A VDFL K++PFFPPTIN+  LH +F  VA +M+  + V+   P+MG+EDF+FY + +P  Y++FLGM NET G     HSPYFT+NEDALPYGAAL ASLA RYLLE  P
Sbjct:  303 QRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHSPYFTINEDALPYGAALQASLATRYLLEHQP 430          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.511e-31
Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = -2
Query:  341 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYLLE 712
            QRI +VI  QA+V  C+ATVDFL  E P FPPT+NN  LH +++ V+ DML  +      PVM SEDF+FYQ+ +PG+F F+GM+N++   +   HSP+F +NE+ LPYGA+L ASLA RYLL+
Sbjct:  302 QRIVQVITTQASVNMCNATVDFLEDETPPFPPTVNNKTLHLFYKNVSVDMLGIENYVETLPVMVSEDFAFYQQAIPGHFSFVGMQNKSHSPMANPHSPFFEVNEELLPYGASLLASLATRYLLD 425          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL6_ORYSJ (IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.850e-30
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = -2
Query:  323 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYLLEFGPKIS 712
            +RIEEVI  QA V  C A VDF   +  F+PPT+N+  ++ + + VAG++L     + + P+MG+EDFSFY +V+P  F+++G++NETLG V   HSPYF ++ED LP GAA HA++A RYL    P  S
Sbjct:  367 RRIEEVITAQARVHGCEAAVDFFENQS-FYPPTVNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYYIGVRNETLGSVHTGHSPYFMIDEDVLPTGAAFHAAIAERYLANHSPSSS 495          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.850e-30
Identity = 68/140 (48.57%), Postives = 94/140 (67.14%), Query Frame = -2
Query:  293 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYLLEFGPKISLPEGNYRDEL 712
            QR++EVI  QAAV RC+A+V+     +   PPT+NN DL+K F+ V  D+L  +     APVMGSEDFS++ E +PG+F  LGM++ET G     HSP + +NED LPYGAA+HAS+A++YL E   K S+    + +EL
Sbjct:  303 QRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNGYAS-SHSPLYRINEDVLPYGAAIHASMAVQYLKEKASKGSV--SGFHEEL 439          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.349e-30
Identity = 66/127 (51.97%), Postives = 89/127 (70.08%), Query Frame = -2
Query:  341 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKV--MAPVMGSEDFSFYQEVMPG-YFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYLLE 712
            +RIEEVI+ Q+AV RC+A VDF +  +P  PPTIN+  LH +FQ VA + L      +  M P MGSEDF+ + E +P  +F+F+G++NE  G V   HSP+F +++ ALPYGAALHASLA+RYL E
Sbjct:  317 RRIEEVIVAQSAVYRCAAAVDFHAGGRPLLPPTINSAALHAHFQAVAAETLGASAAVLGAMEPCMGSEDFAVFSEAVPASHFYFVGVRNEAEGLVHLAHSPHFRVDDAALPYGAALHASLAMRYLDE 443          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.043e-28
Identity = 64/140 (45.71%), Postives = 92/140 (65.71%), Query Frame = -2
Query:  293 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYLLEFGPKISLPEGNYRDEL 712
            +RI+E+I  QAAV RC+A+V+         PPT+NN DL+K F+ V  D+L  +      P MGSEDFS++ E +PG+F  LGM++ET G     HSP++ +NED LPYGAA+HA++A++YL +   K S+    + DEL
Sbjct:  302 ERIKEIITKQAAVHRCNASVNLAPNGNQPMPPTVNNMDLYKKFKKVVRDLLGQEAFVEAVPEMGSEDFSYFAETIPGHFSLLGMQDETQGYAS-SHSPHYRINEDVLPYGAAIHATMAVQYLKDKASKGSV--SGFHDEL 438          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL6_ARATH (IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27
Identity = 54/122 (44.26%), Postives = 83/122 (68.03%), Query Frame = -2
Query:  347 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNETLGKVEFIHSPYFTLNEDALPYGAALHASLALRYL 712
            +RI+EV++ Q  V  C ATV+F  K+   +PPT NN+  + + + V  D+L      +   +MG+EDF+FY E++P  F+F+G++NE LG V   HSP+F ++ED+LP GAA+HA++A RYL
Sbjct:  338 KRIQEVLMDQVGVFGCQATVNFFEKQNAIYPPTTNNDATYNHLKKVTIDLLGDSHFTLAPQMMGAEDFAFYSEIIPAAFYFIGIRNEELGSVHIAHSPHFMIDEDSLPVGAAVHAAVAERYL 459          
BLAST of CF836268 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.852e-27
Identity = 58/123 (47.15%), Postives = 87/123 (70.73%), Query Frame = -2
Query:  347 QRIEEVIIGQAAVQRCSATVDFLSKEKPFFPPTINNNDLHKYFQTVAGDMLDTQKVKVMAPVMGSEDFSFYQEVMPGYFFFLGMKNE-TLGKVEFIHSPYFTLNEDALPYGAALHASLALRYL 712
            +RI+E++   A V RC+ATVDF+ +E+  +P T+N+  ++++ + VA D+L    VKV  P MGSEDF+FY +  P  FF +G+ NE T+ KV  +HSP+F ++ED LP GAALHA++A+ YL
Sbjct:  324 KRIKEIVEAHATVHRCTATVDFMEEERIPYPATVNDEGMYRHARAVAVDVLGEDGVKVGTPFMGSEDFAFYAQRFPAAFFMIGVGNETTMRKVYPLHSPHFVVDEDVLPVGAALHAAVAMEYL 446          
The following BLAST results are available for this feature:
BLAST of CF836268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
ILL4_ARATH1.154e-3955.00IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL1_ORYSJ1.969e-3961.72IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI1.969e-3961.72IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL5_ARATH1.511e-3153.23IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL6_ORYSJ2.850e-3047.69IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sati... [more]
ILL2_ARATH2.850e-3048.57IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL2_ORYSJ6.349e-3051.97IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL1_ARATH2.043e-2845.71IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILL6_ARATH2.258e-2744.26IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsi... [more]
ILL7_ORYSJ3.852e-2747.15IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02L03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02L03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836268 ID=CF836268; Name=CF836268; organism=Citrus sinensis; type=EST; length=713bp
TTTTTTATAGCTAATAATTTACCTCAACCTTATAAGGACATATATATACA
TAATATTTCTGCAATACCCTTTAAATCCTAGGAAATCCGATAGAAATGTT
ATTCGCAATGCCTTAACGATTTCCAAAATTATTTTGTCTTGCTACATTGA
CGAATGATAACTTATTTCCCACCTAACTGAAAATCAATAAGATGTTCTTC
CTTGAATCAAACTTGTATAACAGGACATTCTGGTAACATTTACACCAGTA
CTGGATTCCATAGTCATTGATAAGCAAGTCAACAGTACCTTACAGTTCAT
CGCGGTAGTTTCCCTCTGGCAAAGAAATTTTTGGTCCAAACTCAAGAAGA
TACCTTAAAGCAAGTGATGCATGAAGTGCGGCTCCATAAGGAAGGGCATC
TTCATTGAGTGTGAAGTAGGGGGAGTGTATAAATTCAACCTTCCCAAGGG
TCTCATTCTTCATCCCTAGGAAGAAGAAGTATCCAGGCATTACTTCTTGG
TAAAATGAGAAATCCTCAGATCCCATCACTGGTGCCATAACCTTAACTTT
TTGAGTATCAAGCATATCTCCAGCAACAGTTTGGAAGTACTTGTGCAAAT
CGTTATTGTTTATGGTGGGAGGGAAAAAGGGTTTCTCTTTTGACAGGAAA
TCAACAGTTGCACTGCATCTCTGTACTGCAGCTTGCCCAATGATAACCTC
CTCAATACGTTGC
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