CF837686

Overview
NameCF837686
Unique NameCF837686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF837686 vs. ExPASy Swiss-Prot
Match: PM34_DICDI (Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 45/90 (50.00%), Postives = 70/90 (77.78%), Query Frame = -2 
Query:  430 LEIFLLGALAKLGATIVTYPLLVVKARLQAKQVTTGD---KRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELV 690
            LE+F+LGA+AKL A IVTYP L+VK+RLQ++     +   ++  YKGTLDAI K+ + +GF GF++GM +K+VQ+V+ AA +F++K+++V
Sbjct:  219 LEVFILGAIAKLIAGIVTYPYLLVKSRLQSQSGNASNPESQQQQYKGTLDAIGKIFKSDGFLGFFKGMPSKMVQTVIGAAFMFLVKDKVV 308
The following BLAST results are available for this feature:
BLAST of CF837686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PM34_DICDI3.229e-1850.00Mitochondrial substrate carrier family protein Q O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_05A18_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF837686 ID=CF837686; Name=CF837686; organism=Citrus sinensis; type=EST; length=703bp
TTTTTTTTTTTTTTTTAATCTTGGAGAAGGCAGATCAAATATGTCCTTTT
TAAATCGTGTTTCTAGAATGACATCATACAATTTTCTTGAGCATTTCCAA
TGGTACACATCCGAGAAACCCTGAATGGGCAATGAATCATCTTGTTTCCA
CAATCAATTAGTAGTACATAATGAAACACTTACCCAAAAAGAATGGGGTA
TTAATTGTCAGACTGATCATTCCTAGGCTAAATTGCTAATCCATTCATGT
ATATCCCTCTTATATCAAGGTACAAAGTTATTGATGCTAACAATCCATTT
AATCAACAATTTAACGAGCAACATTGGGCTAAATAGCTTCGAAGAAGGGA
AGGGGGCAGCAAGATGAAGCCACTGTCATGGAGGCTTTGACTTCGGTTTA
TTCTGGGCAAGCAAGAACCGAGCACCCTTGACAAGCTCTTCCTTAATCAT
AAACAATACTGCAGCTGCAAGGACACTTTGCACGATTTTTGTGCCCATGC
CTTGGTAAAAGCCATAGAATCCTTCATATCGGATCATCTTCAGGATGGCA
TCCAATGTGCCTTTATAGTGGTGCCTTTTATCTCCAGTTGTAACTTGTTT
AGCTTGAAGTCTCGCCTTTACAACAAGAAGTGGATATGTTACAATGGTAG
CTCCAAGTTTTGCCAGAGCTCCTAGAAGAAATATCTCTAAAGCAGTTACT
CCA
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