CF837822

Overview
NameCF837822
Unique NameCF837822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.124e-53
Identity = 110/197 (55.84%), Postives = 129/197 (65.48%), Query Frame = -3
Query:  187 CPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRR--GNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 771
            CP VVSCADI+AIAARDSVV+ GGP W V+LG              +IPPPTS+LS LIS F AQGLS ++MVAL+G HT+G+ARCTSFR  IYN++NID+SFA++ Q  CP      DN LA LD QTPT FD             LHSDQ L+NG S D  VK Y  +   F  DF  GMIKMG+I PLTGS G+
Sbjct:  116 CPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETNIDSSFAKTRQASCPSASGSGDNNLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGE 312          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.070e-49
Identity = 104/198 (52.53%), Postives = 129/198 (65.15%), Query Frame = -3
Query:  187 ACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRR--GNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 774
            ACP VVSCADILAIAARDSVV  GGP+W V++G              +IP PTS+LS LISSFSA GLS ++MVAL+G HT+G++RCT+FR  IYN++NI+ +FA + Q+ CPR     D  LA LD  T   FD             LHSDQ LFNG S D +V+ Y+ + S F  DF   MIKMG+I PLTGS+G+
Sbjct:  118 ACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETNINAAFATTRQRTCPRASGSGDGNLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGE 315          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 2.274e-47
Identity = 102/198 (51.52%), Postives = 128/198 (64.65%), Query Frame = -3
Query:  187 ACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRR--GNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 774
            ACP VVSCADILAIAARDSVV  GGP+W V++G              +IP P+ +LS LISSFSA GLS ++MVAL+G HT+G++RC +FR  +YN++NI+ +FA   Q+ CPR     D  LA LD  + T FD             LHSDQ LFNG S D +V+ Y+ S S F  DFA  MIKMG+I PLTGS+G+
Sbjct:   90 ACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETNINAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGE 287          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.880e-47
Identity = 98/196 (50.00%), Postives = 124/196 (63.27%), Query Frame = -3
Query:  187 ACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 774
            ACP VVSCADILA+AARD VV  GGPSW V LG               +PPPTS+L AL++++S + L   +MVAL+G HT+G+A+C+SF GHIYND+NI+ +FA SL+  CP  G  + LA LD  TPT F              LHSDQELFN  S D  V  +A+S + F   F   M+KMGN+ PLTG++GQ
Sbjct:  117 ACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGSFPSQTSD-LPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYNDTNINAAFATSLKANCPMSGGSS-LAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDSTVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQ 310          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 6.618e-47
Identity = 97/195 (49.74%), Postives = 120/195 (61.54%), Query Frame = -3
Query:  187 CPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 771
            CP VVSCADILA+AARDSVV  GG SW V LG               +P P  NLS LIS+FS +G + K +V L+G HT+G+A+CT+FR  IYN+SNID ++A+SLQ  CP  G D  L+  D  TP  FD             LHSDQ+LFNG S D  V  Y+ + + F  DF   MIKMGN+ PLTG++GQ
Sbjct:  113 CPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQ 307          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.129e-46
Identity = 101/198 (51.01%), Postives = 125/198 (63.13%), Query Frame = -3
Query:  187 CPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXS-IPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRR--GNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 771
            CP +VSCADILAI ARDSV++ GGP W V+LG                IPPP + LS LI+ F AQGLS ++MVAL+G HT+G+A+C +FR  IYN SNIDTSFA S ++ CP      DN  ANLD ++P  FD             L SDQ LFN    D LV  Y+ +++ F++DFAR MIKMG+I PLTGS GQ
Sbjct:  110 CPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASNIDTSFAISKRRNCPATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQ 307          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.515e-46
Identity = 96/195 (49.23%), Postives = 124/195 (63.59%), Query Frame = -3
Query:  187 CPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 771
            CP +VSCADILA+AARD VV  GGPSW V LG               +PPPTS+L  L+S+++ + L+  +MVAL+G HT+G+A+C+SF  HIYND+NI+++FA SL+  CPR G+   LA LD  TP  FD             LHSDQELFN  S D  V+ +A+S S F   FA  M+KMGN+ P TG+ GQ
Sbjct:  118 CPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTNINSAFAASLRANCPRAGS-TALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQ 310          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.743e-45
Identity = 93/197 (47.21%), Postives = 123/197 (62.44%), Query Frame = -3
Query:  187 CPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPR--RGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 771
            C + VSCADILA+AARDSVV  GGPSW V LG               +P P+S+L+ LI +FS +GL + +MVAL+G HT+G+A+C +FR  +YN++NID+SFA +L+  CPR     D+ LA LD  TP  FD             LHSDQ LFNG S D  V+ ++++ + F   F   M+KMGNI PLTG+ GQ
Sbjct:  109 CSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQ 305          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.194e-45
Identity = 96/197 (48.73%), Postives = 125/197 (63.45%), Query Frame = -3
Query:  187 CPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCP-RRGN-DNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 771
            CP VVSCADILA+AARDSVV  GGPSW+V LG               +P P+ +L+ L ++F+ + LS  ++VAL+G HT+G A+C +FR HIYND+N++ +FA   +  CP   GN D  LA LD  TPT FD             LHSDQ+LFNG + D LV+ YA++   F +DFA  MI+MGNI PLTG+ GQ
Sbjct:  116 CPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTNVNAAFATLRRANCPAAAGNGDGNLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATDGLVRTYASTPRRFSRDFAAAMIRMGNISPLTGTQGQ 312          
BLAST of CF837822 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 8.090e-45
Identity = 93/197 (47.21%), Postives = 123/197 (62.44%), Query Frame = -3
Query:  187 CPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPR--RGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQ 771
            C + VSCADILA+AARDSVV  GGPSW V LG               +P P+S+L+ LI +FS +GL + +MVAL+G HT+G+A+C +FR  +YN++NID+SFA +L+  CPR     D+ LA LD  TP  FD             LHSDQ LFNG S D  V+ ++++ + F   F   M+KMGNI PLTG+ GQ
Sbjct:  109 CSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTVAMVKMGNISPLTGTQGQ 305          
The following BLAST results are available for this feature:
BLAST of CF837822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER4_VITVI2.124e-5355.84Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER52_ARATH7.070e-4952.53Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PERP7_BRARA2.274e-4751.52Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER42_MAIZE3.880e-4750.00Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER1_ARAHY6.618e-4749.74Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER67_ARATH1.129e-4651.01Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER66_MAIZE2.515e-4649.23Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER2_ORYSJ4.743e-4547.21Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER70_MAIZE6.194e-4548.73Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER2_ORYSI8.090e-4547.21Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05E11_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF837822 ID=CF837822; Name=CF837822; organism=Citrus sinensis; type=EST; length=776bp
CCCTTTTTTTTGGTCTGAACGTTCTGGTTTTGGCAAATTAACTTTTAATC
AGACATATCGATTGGCTGCTGCAATCATTAATACTCTGTTTACGTACAAC
GCCACACATGTTCATATTAGAAATATTGTAGCTTATTACAAGATGCAGAT
AATTTTTCAATTGATTTTTCTGCAATTGATCCTGATCTGTCCAGCACTTC
CTGTGAGAGGTTTGATGTTGCCCATCTTGATCATACCCCTGGCGAAGTCC
TTGAAAAAAACAGAGATGCTAGCAGCGTATCTTTTGACCAGAAAATCAGC
AGAATTGCCATTAAAGAGCTCTTGGTCAGAATGAAGAAGCCCCTTCTTGT
TCAACAGATTCTTGTAATATAAATTGTCAAAGCACGTTGGAGTTTGACGG
TCAAGGTTTGCCAGAACATTGTCATTTCCTCTTCTTGGGCATCTCTGCTG
CAAGGACCTGGCGAAGCTGGTGTCAATATTGGAATCGTTGTAAATGTGTC
CTCGAAATGATGTGCACCTTGCCTTGCCTACCGTATGTCCACCAGCAAGA
GCCACCATGTTCTTTAATGAGAGACCCTGTGCCGAGAAGCTTGATATGAG
AGCACTCAAATTAGAAGTGGGTGGAGGGATGGAGGTATTTGCCGCTGCCC
TGCTAGCAGTGGTAGAATCTCTTCTTCCCAATCTAACTTTCCATGAAGGA
CCTCCGAAAACAACAACTGAATCGCGTGCGGCAATGGCAAGAATATCTGC
ACACGAAACAACACGGGGGCATGCTT
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