CF837921

Overview
NameCF837921
Unique NameCF837921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.620e-67
Identity = 127/169 (75.15%), Postives = 139/169 (82.25%), Query Frame = -2
Query:  271 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNCGK 777
            HTFNYLV+NG+TYCVVA +S+GRQIPMAFLERVK++F  +YGGGKAATA AN LNKEFG KLKE MQYC+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GT+MRRKMW QNM                  LS+C GFNCGK
Sbjct:   53 HTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNCGK 221          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 7.624e-67
Identity = 126/167 (75.45%), Postives = 139/167 (83.23%), Query Frame = -2
Query:  277 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 777
            HTFNYLV++G+TYCVVA +S+GRQIPM+FLERVK++F  +YGGGKAATA AN LNKEFG KLKE MQYC+DHP+EISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+TGT+MRRKMWLQNM                  LSVCHGF C
Sbjct:   53 HTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 4.184e-65
Identity = 122/167 (73.05%), Postives = 134/167 (80.24%), Query Frame = -2
Query:  277 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 777
            HTFNYL DNG+TYCVV  ES+GRQIPMAFLERVK++F  +YGGGKA+TA AN LNKEFG KLKE MQYC DHPEEISKL+KVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GTKM+RK+W +NM                  LSVCHGF C
Sbjct:   53 HTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKC 219          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 2.712e-64
Identity = 123/167 (73.65%), Postives = 134/167 (80.24%), Query Frame = -2
Query:  277 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 777
            HTFNYLV+NG+TYCVVA ES GRQIPMAFLERVK++F  +YGGGKA TA AN LN+EFG KLKE MQYCVDHP+EISKLAKVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GTK+RRKMW +NM                  LSVC GF C
Sbjct:  118 HTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKC 284          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 8.184e-53
Identity = 98/167 (58.68%), Postives = 122/167 (73.05%), Query Frame = -2
Query:  277 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 777
            HTFN+LV++GY YCVVA +S  +QI +AFLERVK +F  +YGGGKA+TA+A  LNKEFGP +KE M Y VDH EEI KL KVKAQVSEVK +M+ENI+K +DRGE + +L DKTENL  QAQ+++  GT++RRK+W QNM                  +SVCHGFNC
Sbjct:   54 HTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNC 220          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.352e-47
Identity = 101/169 (59.76%), Postives = 116/169 (68.64%), Query Frame = -2
Query:  271 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNCGK 777
            HTFN LV+NG+TYCVVA +S+GR+IPMAFLERVK++F  +YGG KAAT  AN LNKEFG  LKE MQYC+DHP+EIS LAK KAQVSEVK +MMENIEKVL RG   E+L     +   Q Q F    T+M+RK W QNM                  LSVC GFNCGK
Sbjct:   53 HTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK 217          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.682e-45
Identity = 93/186 (50.00%), Postives = 119/186 (63.98%), Query Frame = -2
Query:  277 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAAT-------------------ALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 777
            HTFN+LVDNG+ + VVADES+GR +P  FLERVK++F  +Y                          ++A  L++EFGP LKE MQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLDRGEKIELLVDKTENL  QA  F+  G ++RRKMWLQ++                  +  C GF C
Sbjct:   53 HTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKC 238          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.825e-23
Identity = 59/164 (35.98%), Postives = 90/164 (54.88%), Query Frame = -2
Query:  286 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHG 777
            + F+    +G T   +ADE++GR IP AFL+ +   FV  YG     +A A  +N EF   L + M++  + P    +++++K ++S+V+ VM+ENI+KVLDRGE++ELLVDKTEN+      FR    + R  MW +N+                    VCHG
Sbjct:   52 YIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIALILVLALVVYIAMAFVCHG 213          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 8.825e-23
Identity = 58/164 (35.37%), Postives = 90/164 (54.88%), Query Frame = -2
Query:  286 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHG 777
            + F+    +G T   +A+E++GR+IP AFLE +   FV  YG     TALA  +N+EF   L + + Y  + P    ++ ++K ++++V+GVM+ENI+KVLDRGE++ELLVDKT N+      FR    + R  +W +N                     +CHG
Sbjct:   51 YVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTVLLILLLLVIIYIAVAFLCHG 212          
BLAST of CF837921 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.153e-22
Identity = 58/169 (34.32%), Postives = 96/169 (56.80%), Query Frame = -2
Query:  274 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATALANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENI-EKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNCG 777
            + F+YLV +  TY  +ADE  GR+IP  FL+ VK+ F S Y G K  TA+A G+N +F   L+ LM +   +   +  +++  A++ EVK +++ +I  ++L RGEKIE+LV++T+ L+QQ+  F+    +++  MW +N+                  +S C GF  G
Sbjct:   50 YIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKNVKLMLVLGAIVLIIIFIIVMSYCDGFRSG 216          
The following BLAST results are available for this feature:
BLAST of CF837921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
VA722_ARATH2.620e-6775.15Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA721_ARATH7.624e-6775.45Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA726_ARATH4.184e-6573.05Putative vesicle-associated membrane protein 726 O... [more]
VA725_ARATH2.712e-6473.65Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA724_ARATH8.184e-5358.68Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA723_ARATH1.352e-4759.76Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA727_ARATH3.682e-4550.00Vesicle-associated membrane protein 727 OS=Arabido... [more]
VA713_ARATH8.825e-2335.98Vesicle-associated membrane protein 713 OS=Arabido... [more]
VA711_ARATH8.825e-2335.37Vesicle-associated membrane protein 711 OS=Arabido... [more]
VAM7B_DICDI1.153e-2234.32Vesicle-associated membrane protein 7B OS=Dictyost... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05H02_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF837921 ID=CF837921; Name=CF837921; organism=Citrus sinensis; type=EST; length=781bp
TTTTTTTTTAGCTAAGAAGGCCTATTTTAGTTCTGGCCGGTATAATCAGC
AGCAGCATCTTTGCACAAGTATTCTCACAATATAATGACGGGACTCATTC
ACAAGCAAAAATAAGTTTTCGGTTTTCTTTGTAACAAATATAGGGAAACT
GCTAACTTTTTTAGACTAAATACAAAGTCAAGATCATATATATTTATATA
TCTCTTTCACAATATCATCACAGAAGCTCTTAGAAGAGCGTAATATAAGC
CTCCTGGAGAATAGCACTCATTTTCCGCAGTTGAAACCATGGCAAACAGA
GAGGACTATGATGAGGATCAAGGCAATCAGTATTCCCAAAACAATCAGCT
TGATCTTCATATTTTGCAGCCACATTTTCCTCCGCATTTTGGTCCCCGTA
CTCCGAAAGTCTTGTGCCTGCTGATGAAGGTTCTCAGTCTTATCGACCAG
TAGCTCAATCTTTTCCCCCCTATCTAAAACCTTTTCAATATTCTCCATCA
TAACACCTTTGACTTCTGAAACCTGAGCCTTAACCTTCGCAAGCTTGCTG
ATCTCCTCAGGATGATCAACACAGTACTGCATAAGTTCTTTCAATTTTGG
TCCAAATTCCTTGTTCAGGCCATTGGCAAGAGCCGTGGCAGCCTTTCCAC
CCCCATATTTGGAAACAAATTCATCCTTGACGCGCTCCAGAAAAGCCATC
GGTATTTGTCTTCCGGACGATTCATCTGCGACCACACAATATGTGTAACC
ATTATCGACGAGATAATTGAAGGTGTGAGCA
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