CF837933

Overview
NameCF837933
Unique NameCF837933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.668e-79
Identity = 139/166 (83.73%), Postives = 152/166 (91.57%), Query Frame = 1
Query:  361 YKLYQRLRFKLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIXQDCTDPQNYGKSVLVKKYLGAVAXQHI 858
            Y LYQRLRFKLPPGPRP P+VGNLYDIKPVRFRCFAEWAQ YGPIISVWFGSTLNVIVSN+ELA+EVLKEHDQ LADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELF+PKRLEALRPIREDEVT+MV+S+   CT  +N GK +L++K+LG VA  +I
Sbjct:   18 YTLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNI 183          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.086e-72
Identity = 128/167 (76.65%), Postives = 146/167 (87.43%), Query Frame = 1
Query:  358 AYKLYQRLRFKLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIXQDCTDPQNYGKSVLVKKYLGAVAXQHI 858
            +YKL QRLR+K PPGP P PIVGNLYDIKPVRFRC+ EWAQ YGPIISVW GS LNV+VS+ ELA+EVLKEHDQ+LADRHR+RS   FSR+G+DLIWADYGPHYVKVRKVCTLELFTPKRLE+LRPIREDEVTAMVES+ +DC  P+N  K + ++KYLGAVA  +I
Sbjct:   16 SYKLIQRLRYKFPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNI 182          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.621e-62
Identity = 113/165 (68.48%), Postives = 137/165 (83.03%), Query Frame = 1
Query:  367 LYQRLRF-KLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIXQDCTDPQNYGKSVLVKKYLGAVAXQHI 858
            L  RLR  +LPPGPRP P++GNL  IKP+R RCF EWA++YGP+ISVWFGS L V+VS +ELA+EVLKE+DQQLADR R+RS  +FSR+G+DLIWADYGPHY+KVRK+C LELFTPKRLEALRPIREDEVTAMVES+ +  T P N GK ++V+ +L  VA  +I
Sbjct:   22 LLNRLRLGRLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNI 186          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.438e-24
Identity = 53/132 (40.15%), Postives = 85/132 (64.39%), Query Frame = 1
Query:  388 KLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIXQD 783
            +LPPGP P PI+GN + ++    R     A++YGPI+ + FGS   V+VS++E A+  LK HD   A R  +     F  + KD+ ++ YG H+ K+RK+C LEL T KR+E+ + +R++E++AM+ SI ++
Sbjct:   41 RLPPGPYPWPIIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEE 172          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.541e-23
Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 1
Query:  367 LYQR---LRFKLPPGPRPLPIVGNLYDIK---PVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESI 774
            LYQ+    R+KLPPGP PLP++GNL  ++   P RF  FA WA++YGPI+S   GS   V++S+ ELA+E+LK  D   ADR   R     S   +D+    Y P+Y ++RK+    LF+P R+   + +RE+E   M++ I
Sbjct:   19 LYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRF--FAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKI 158          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.757e-22
Identity = 56/149 (37.58%), Postives = 95/149 (63.76%), Query Frame = 1
Query:  388 KLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIXQDCTDPQNYGKSVLVKKYL 834
            KLPPGP  LPI+GNL+ +  + ++ F + +Q+YGP++ +  G    ++VS+ E A EVLK HD +   R ++ +   F+ + KD+ +A +G  + ++RK+ TLELF+ K+L++ R IRE+E   +V+ I +   + QN   SV ++K L
Sbjct:   27 KLPPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQN--SSVDLRKVL 173          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.678e-22
Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 1
Query:  391 LPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIXQDCTDPQNYGKSV 816
            LPPGP  LPI+GN++ +  +  R   + + +YGP+I+V+ GS   V+V + E A EVLK HD +   R +      F  DG  L +  +G +Y  VRK+C LELF+ KR  + R IRE+E++ +V S     +D  + G SV
Sbjct:   36 LPPGPPRLPILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSF----SDSASSGSSV 173          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.678e-22
Identity = 49/131 (37.40%), Postives = 81/131 (61.83%), Query Frame = 1
Query:  382 RFKLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESI 774
            +  LPP P  LP++GNL+ +     R     + +YGP++ + FG    ++VS+ E A+EVLK HD + A+R RS++       G+D+++A YG ++ +++ VC L L T K +E+   +REDEV AM+E +
Sbjct:   30 KVNLPPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKL 160          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.722e-22
Identity = 49/133 (36.84%), Postives = 86/133 (64.66%), Query Frame = 1
Query:  382 RFKLPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIXQ 780
            +F LPP P  LPI+GNL+ +  +  RCF + + +YGP++ +  GS   V++S++E A  VLK +D +   R ++  + K S   KD+ +A YG ++ +VRK+  +ELF+ K++++ R IRE+EV  +V+ + +
Sbjct:   28 KFNLPPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSE 160          
BLAST of CF837933 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.722e-22
Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 1
Query:  391 LPPGPRPLPIVGNLYDIKPVRFRCFAEWAQQYGPIISVWFGSTLNVIVSNTELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIXQDCTDPQNYGKSVLV 822
            LPP P  LPI+GNL+ +  +  R     A + GP+I +  G    +IVS  E+A E+LK HD   A R  + +A +   D  D+ ++ YG ++ +VRK+C LEL + KR+ + R IRE+EV  M+E I Q C+  +    S L+
Sbjct:   31 LPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELL 174          
The following BLAST results are available for this feature:
BLAST of CF837933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
C98A2_SOYBN2.668e-7983.73Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH1.086e-7276.65Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI8.621e-6268.48Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C75A1_PINTA1.438e-2440.15Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C83A1_ARATH3.541e-2341.55Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BZ_ARATH1.757e-2237.58Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH6.678e-2239.44Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71AD_ARATH6.678e-2237.40Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH8.722e-2236.84Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71A1_PERAE8.722e-2238.19Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_05H08_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF837933 ID=CF837933; Name=CF837933; organism=Citrus sinensis; type=EST; length=858bp
TTCATGTGAGTCGGCCAACCATTAAAAACCATATGCTTGGGCGTGCCATT
CATCAATTCTCATTCATGGCAACCATTCATTTCATGCTTTAGCTAGTGAG
TGGTGACTTAAATTTTAGTTTCCCACGATATAATTATTATTTTTCTTTTA
TCTTTTTTATTTACATGACGTAATTTCTTAACAACGTAAGCAAATTCATC
CACCAACTCCCCCGTTCTTCATCTCATATATGTCTCTAAGTCTATTGGTC
TAACTCAAGCCCAACCATTTCATTTCCGAAGTTTCAAGAAAAAGGAAACC
AACCAACACAAAATGACTCTCCCACTCATCCCATTATCAATCATTTTCAT
CATCCTTGCATACAAGCTCTACCAACGGCTGAGATTCAAGCTCCCGCCCG
GCCCTCGTCCCTTGCCAATCGTCGGAAACCTCTACGACATAAAGCCGGTG
AGGTTCCGGTGCTTTGCGGAATGGGCTCAACAATACGGACCAATCATTTC
GGTTTGGTTCGGCTCGACTTTGAACGTGATTGTGTCCAACACAGAATTGG
CTAGAGAAGTGCTTAAAGAGCATGATCAACAATTGGCCGACAGGCATCGA
AGTAGATCAGCTGCAAAGTTCAGCAGAGATGGCAAGGACCTCATTTGGGC
CGATTATGGGCCTCACTACGTCAAGGTTCGTAAAGTCTGCACGCTCGAGC
TTTTTACGCCGAAGAGATTAGAGGCTCTGCGACCAATTAGAGAGGATGAA
GTCACAGCCATGGTTGAATCCATTTTNCAAGACTGCACCGATCCTCAAAA
TTATGGGAAGAGTGTACTAGTGAAGAAGTATTTGGGAGCAGTGGCATTNC
AACACATT
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