CF837958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF837958 vs. ExPASy Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.367e-57 Identity = 105/148 (70.95%), Postives = 124/148 (83.78%), Query Frame = -1 Query: 311 DVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSNMLDDPYAMKNAAVPIS 754 DVGDR++AEKVSYFF++PEVSDIVIF+APPIL E G+S DVFIKRIVA+ GD VEV GKLLVN Q EDF+LEP+ YEM+P+ VPEGYVFVLGDNRN SFDSHNWGPLPI+NI+GRSVFRYWPPS+VS+++ + AV +S Sbjct: 220 DVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDIIHHEQVSQKRAVDVS 367
BLAST of CF837958 vs. ExPASy Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 6.787e-57 Identity = 105/151 (69.54%), Postives = 125/151 (82.78%), Query Frame = -1 Query: 311 DVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL---QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSNMLDDPYAMKNAAVPIS 754 D GDR++AEKVSYFF++PEVSDIVIF+APPIL E G+SS DVFIKRIVA+ GD VEV GKL VN + Q+EDF+LEP++YEM+P+ VP+GYVFVLGDNRN SFDSHNWGPLPIENIVGRSVFRYWPPS+VS+ + A+ V +S Sbjct: 190 DKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVSDTIYHDQAITRGPVAVS 340
BLAST of CF837958 vs. ExPASy Swiss-Prot
Match: PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 7.765e-53 Identity = 93/131 (70.99%), Postives = 115/131 (87.79%), Query Frame = -1 Query: 362 DVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVS 754 DVGDR++AEKVSY+F++P +DIVIF++PP+LQE+G++ DVFIKRIVA GD VEVH GKL+VNGVA++E FILEP YEM P+ VPE VFV+GDNRNNS+DSH WGPLP++NI+GRSVFRYWPP+RVS Sbjct: 148 DVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVS 278
BLAST of CF837958 vs. ExPASy Swiss-Prot
Match: LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803) GN=lepB1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32 Identity = 65/127 (51.18%), Postives = 88/127 (69.29%), Query Frame = -1 Query: 368 GDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 748 GDR++ EKVSY F P+V DI++F P +LQ G+ G FIKR++A G VEV+ G + +G E++ILEP Y + V VP+G VFV+GDNRNNS DSH WG LP +NI+G ++FR++P SR Sbjct: 52 GDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNNSNDSHVWGFLPQQNIIGHALFRFFPASR 178
BLAST of CF837958 vs. ExPASy Swiss-Prot
Match: LEP_PHOLA (Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29 Identity = 58/137 (42.34%), Postives = 87/137 (63.50%), Query Frame = -1 Query: 344 DVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSNMLDDP 754 +V DR++ EK+SY F P DI++F L++ S + FIKR++ G+ V+V GG++L+NG +E++I P Y+ P VP VLGDNRNNS+DSH WG +P +NI+GR+V R+WP +R+ + P Sbjct: 65 EVNDRLIVEKISYHFNPPRRGDIIVFHPTEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVPADSFLVLGDNRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLGELGPPP 201
BLAST of CF837958 vs. ExPASy Swiss-Prot
Match: LEP2_SYNY3 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803) GN=lepB2 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = -1 Query: 347 VGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSNMLDD 751 + DR++ EK+SY + PE +IV+F L+ F D FIKRI+ GD V V G + VNG DE++I P AYE PV VP+ VLGDNRNNS+DSH WG +P E ++GR+ R+WP RV + DD Sbjct: 59 INDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNFH--DAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRVGLLTDD 191
BLAST of CF837958 vs. ExPASy Swiss-Prot
Match: LEP_MYCTU (Probable signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14 Identity = 57/174 (32.76%), Postives = 79/174 (45.40%), Query Frame = -1 Query: 368 VGDRILAEKVSYFFKRPEVSDIVIFRAPP---------------------ILQEIGFSSGDV--FIKRIVATAGDCVEVHGGK-LLVNGVAQDEDFI------LEPLAY-----EMDPVVVPEGYVFVLGDNRNNSFDSHNWGPL-----------PIENIVGRSVFRYWPPSR 751 VGDRI+ +K+SY F P+ D+++FR PP L IGF D +KR++A G V+ L VNG E ++ +P Y E PV VP G V+V+GDNR +S DS PL P+ N++G++ WPPSR Sbjct: 108 VGDRIMVDKLSYRFGSPQPGDVIVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGRPLKEPYLDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSR 281
BLAST of CF837958 vs. ExPASy Swiss-Prot
Match: LEP_MYCLE (Probable signal peptidase I OS=Mycobacterium leprae GN=lepB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.165e-14 Identity = 54/181 (29.83%), Postives = 80/181 (44.20%), Query Frame = -1 Query: 368 VGDRILAEKVSYFFKRPEVSDIVIFRAPP---------------------ILQEIGFSSGDV--FIKRIVATAGDCVEVHGGK-LLVNG----------VAQDEDFILEP-LAYEMDPVVVPEGYVFVLGDNRNNSFDSH------------------NWGPLPIENIVGRSVFRYWPPSR 751 VGDRI+ +K++Y F P+ D+++F+ PP L +GF D +KR++A G V+ L VNG V + D P L E PV VP+G ++V+GDNR +S DS N G +P+ N++G++ WPPSR Sbjct: 96 VGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPLKEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSRYHCNSTDVVNGLSCTGDPNSGTVPVSNVIGKARVVVWPPSR 276 The following BLAST results are available for this feature:
BLAST of CF837958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF837958 ID=CF837958; Name=CF837958; organism=Citrus sinensis; type=EST; length=754bpback to top |