CK702276

Overview
NameCK702276
Unique NameCK702276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 9.827e-60
Identity = 121/184 (65.76%), Postives = 129/184 (70.11%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI*EDAGDADADMPPLE 606
            +GQLKEFEGKKLVSAT                          CKV+KDVLG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSL++PNTFGNRIHRMLKLGLSI E++GDADADMP LE
Sbjct:  501 IGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALE 684          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.086e-58
Identity = 123/185 (66.49%), Postives = 127/185 (68.65%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI*ED-AGDADADMPPLE 606
            VGQLKEFEGKKLVSAT                          CKVIK+VLG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IMEELRKRADADKNDKSVKD           TSGFSLDDPNTFG+RIHRMLKLGLSI ED   +AD DMPPLE
Sbjct:  503 VGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLE 687          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.086e-58
Identity = 123/185 (66.49%), Postives = 127/185 (68.65%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI*ED-AGDADADMPPLE 606
            VGQLKEFEGKKLVSAT                          CKVIK+VLG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IMEELRKRADADKNDKSVKD           TSGFSLDDPNTFG+RIHRMLKLGLSI ED   +AD DMPPLE
Sbjct:  503 VGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLE 687          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 2.420e-58
Identity = 122/185 (65.95%), Postives = 128/185 (69.19%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI*ED-AGDADADMPPLE 606
            VGQLKEFEGKKLVSAT                          CKVIK+VLG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSL+DPNTFG RIHRMLKLGLSI ED + +ADADMPPLE
Sbjct:  503 VGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLE 687          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.420e-58
Identity = 122/185 (65.95%), Postives = 128/185 (69.19%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI*ED-AGDADADMPPLE 606
            VGQLKEFEGKKLVSAT                          CKVIK+VLG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSL+DPNTFG RIHRMLKLGLSI ED + +ADADMPPLE
Sbjct:  503 VGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLE 687          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.392e-58
Identity = 121/185 (65.41%), Postives = 129/185 (69.73%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-*EDAGDADADMPPLE 606
            +GQLKEFEGKKLVSAT                          CKVIKDVLG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSLD+PNTFG+RIHRMLKLGLSI  +DA +ADA+MPPLE
Sbjct:  501 IGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDAVEADAEMPPLE 685          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 1.569e-57
Identity = 120/185 (64.86%), Postives = 127/185 (68.65%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-*EDAGDADADMPPLE 606
            +GQLKEFEGKKLVSAT                          CKVIKDVLG               PCCLVTGEYGWTANMERIMKAQALRD+SM GYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSLD+PNTFG+RIHRMLKLGLSI  +D  +ADADMPPLE
Sbjct:  501 IGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDVVEADADMPPLE 685          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 8.058e-54
Identity = 114/185 (61.62%), Postives = 123/185 (66.49%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXX-CKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI*EDAGDADADMPPLE 606
            VGQLKE++GKKLVSAT                           CK+IKD+LG               PCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD           TSGFSLDDPNTFG RIHRMLKLGLSI E+    DADMP LE
Sbjct:  506 VGQLKEYDGKKLVSATKEGLKLEDDDEEEKKKREEKKKSFENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSIDEEEAGDDADMPALE 690          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.164e-52
Identity = 114/187 (60.96%), Postives = 124/187 (66.31%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXX--CKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI*ED-AGDADADMPPLE 606
            VGQLKE++GKKLVSAT                            CKVIKD+LG               PCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+AD+NDKSVKD           TSGFSLDDPNTF  RIHRMLKLGL+I ED A D DADMP L+
Sbjct:  516 VGQLKEYDGKKLVSATKEGLKLDDEDDEEAKKRREERKKRFEELCKVIKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSAYMSSKKTMEINPDNGIMEELRKRAEADRNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLNIDEDAAADEDADMPALD 702          
BLAST of CK702276 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.286e-51
Identity = 113/186 (60.75%), Postives = 122/186 (65.59%), Query Frame = 1
Query:   55 VGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXX-CKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-*EDAGDADADMPPLE 606
            VGQLKE++GKKLVSAT                           CK+IKD+LG               PCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD           TSGFSLDDPNTF  RIHRMLKLGLSI  E+    DADMP LE
Sbjct:  302 VGQLKEYDGKKLVSATKEGLKLDDDSEEEKKKKEEKKKSFENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLSIDEEEEAVEDADMPALE 487          
The following BLAST results are available for this feature:
BLAST of CK702276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
HSP80_SOLLC9.827e-6065.76Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP81_ORYSJ1.086e-5866.49Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.086e-5866.49Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ2.420e-5865.95Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ2.420e-5865.95Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP82_ARATH5.392e-5865.41Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP83_ARATH1.569e-5764.86Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI8.058e-5461.62Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_MAIZE1.164e-5260.96Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HSP82_TOBAC1.286e-5160.75Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5538 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE50C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK702276 ID=CK702276; Name=CK702276; organism=Citrus sinensis; type=EST; length=608bp
AGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTAC
GCCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAA
CCAAAGAAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAGAAGAAG
GAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGT
TTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGTGTTGTTGACT
CACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCCAACATGGAG
AGGATCATGAAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACAT
GTCCAGCAAGAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGG
AGCTCAGGAAGAGGGCTGATGCTGACAAGAATGACAAGTCTGTGAAGGAC
CTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTCACTTCTGGTTTCAGCCT
TGATGACCCTAACACTTTCGGCAACAGAATCCACAGGATGTTGAAACTCG
GGCTGAGCATCTAGGAGGATGCTGGTGATGCTGATGCTGACATGCCACCA
TTGGAGGA
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