CK702303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.378e-39 Identity = 49/64 (76.56%), Postives = 52/64 (81.25%), Query Frame = 2 Query: 2 LVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 LV DDAWLNGEFI+TVQQRGAAIIKARK CDHIRDWVLGTP+GT+VSMGVYSDG Sbjct: 213 LVSDDAWLNGEFISTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPQGTFVSMGVYSDG 276 HSP 2 Score: 77.7962 bits (190), Expect = 4.378e-39 Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 P+GLIYSFPVTC NGEW IVQGLSIDEFSRKKLDLTAEE Sbjct: 281 PSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 2.141e-38 Identity = 50/64 (78.12%), Postives = 53/64 (82.81%), Query Frame = 2 Query: 2 LVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 LVKDDAWL+GEFI+TVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMGVYSDG Sbjct: 213 LVKDDAWLDGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDG 276 HSP 2 Score: 74.3294 bits (181), Expect = 2.141e-38 Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 P+GLIYSFPVTCRNG+W+IVQGL IDE SRKK+DLTAEE Sbjct: 281 PSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.634e-38 Identity = 48/64 (75.00%), Postives = 52/64 (81.25%), Query Frame = 2 Query: 2 LVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 LVK+D WLNGEFI+TVQQRGAAIIKARK CDHIRDWV+GTPEGT+VSMGVYSDG Sbjct: 213 LVKNDEWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVVGTPEGTFVSMGVYSDG 276 HSP 2 Score: 76.6406 bits (187), Expect = 3.634e-38 Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 PAGLIYSFPVTCRNGEWTIVQGL ID+ SRKK+DLTAEE Sbjct: 281 PAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.734e-38 Identity = 51/64 (79.69%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 2 LVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 LV DDAWLNGEFITTVQQRGAAIIKARK CDHI DWVLGTPEGTWVSMGVYSDG Sbjct: 213 LVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIHDWVLGTPEGTWVSMGVYSDG 276 HSP 2 Score: 70.0922 bits (170), Expect = 4.734e-38 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 PAG+IYSFPVTC+NGEWTIVQGL ID+ SRKK+D TA E Sbjct: 281 PAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.116e-37 Identity = 52/64 (81.25%), Postives = 52/64 (81.25%), Query Frame = 2 Query: 2 LVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 LV DDAWLNGEFITTVQQRGAAIIKARK CDHIRDWVLGTPEGTWVSMGVYSDG Sbjct: 213 LVADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG 276 HSP 2 Score: 64.6994 bits (156), Expect = 5.116e-37 Identity = 28/39 (71.79%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 PAG+IYSFPVTC++GEW IVQGL IDE SR+K+D T E Sbjct: 281 PAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 6.664e-37 Identity = 50/64 (78.12%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 2 LVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 LV DD WLNGEFITTVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMGVYSDG Sbjct: 213 LVSDDEWLNGEFITTVQQRGAAIIKARKFSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDG 276 HSP 2 Score: 69.707 bits (169), Expect = 6.664e-37 Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 P+GLIYSFPVTC GEW IVQGL IDEFSRKK+D TA+E Sbjct: 281 PSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.919e-36 Identity = 48/64 (75.00%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 2 LVKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 LV DD WLN EFI+TVQQRGAAIIKARK CDHIRDWVLGTPEGT+VSMGVYSDG Sbjct: 213 LVADDEWLNTEFISTVQQRGAAIIKARKQSSALSAASSACDHIRDWVLGTPEGTFVSMGVYSDG 276 HSP 2 Score: 73.1738 bits (178), Expect = 1.919e-36 Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 PAGLIYSFPVTC GEWTIVQGL IDEFSRKK+D TA+E Sbjct: 281 PAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 3.742e-27 Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 5 VKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 +KDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG Sbjct: 213 LKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 275 HSP 2 Score: 55.4546 bits (132), Expect = 3.742e-27 Identity = 23/39 (58.97%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 P L+YSFPVT +N W +V+GL+I++FSR+K+DLTA+E Sbjct: 281 PDDLLYSFPVTIKNKTWKVVEGLTINDFSREKMDLTAKE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 86.6557 bits (213), Expect = 8.255e-27 Identity = 41/63 (65.08%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 5 VKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 VKDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG Sbjct: 213 VKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 275 HSP 2 Score: 53.1434 bits (126), Expect = 8.255e-27 Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 P L+YSFPVT ++ W IV+GL I++FSR+K+DLTA+E Sbjct: 281 PDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKE 319
BLAST of CK702303 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 2.370e-26 Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 5 VKDDAWLNGEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDG 193 +KDD+WL GEFITTVQQRGAA+IKARK CDH+RD GTPEG +VSMG+ SDG Sbjct: 213 LKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 275 HSP 2 Score: 52.7582 bits (125), Expect = 2.370e-26 Identity = 22/39 (56.41%), Postives = 32/39 (82.05%), Query Frame = 1 Query: 211 PAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEE 327 P L+YSFPVT ++ W +V+GL I++FSR+K+DLTA+E Sbjct: 281 PDDLLYSFPVTIKDKTWKVVEGLPINDFSREKMDLTAKE 319 The following BLAST results are available for this feature:
BLAST of CK702303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CK702303 ID=CK702303; Name=CK702303; organism=Citrus sinensis; type=EST; length=332bpback to top |